Pseudomonas sp. ML2-2023-3: V6P94_09470
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Entry
V6P94_09470 CDS
T10712
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml00550
Peptidoglycan biosynthesis
psml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6P94_09470 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psml01002
]
V6P94_09470 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
V6P94_09470 (dacB)
Enzymes [BR:
psml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V6P94_09470 (dacB)
Peptidases and inhibitors [BR:
psml01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
V6P94_09470 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
V6P94_09470 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WWT72859
LinkDB
All DBs
Position
complement(2039244..2040710)
Genome browser
AA seq
488 aa
AA seq
DB search
MIKSLRPLLLASLLLPLAFGANAAPVNTTLSPKVQQALKTNKLQNDALSLVLLPLNGPGI
PTVFNADVSMNPASTMKLVTTYAALEMLGPTHQWKTEFYTDGTLNNGTLQGNLYLKGGGD
PKLNMEKLWLLMRDLRANGVQQVTGDLVLDRNFFNQPQLPVFNDDGNDKNKPFLVKPDSL
LVNLKALRFVARNDGGKVLISVEPPIASIKIDNQVKAVNAKQCTGDVRYNPVPQADGSVL
VTVSGQLADGCNSQTYLSLLDHATYTAGAVRAIWKELGGSIQGQDRQASVPKNSKLLARA
FSPDLAEIIRDINKYSNNTMAQQLFLSLGAQFRNDADGDDAKAAQRVVRQWLAKKGITAP
HLVMENGSGLSRAERVSAREMAQMLQAAWQSPYAAEFISSMPIAGKDGTMRKRLKTTAMN
GQAHIKTGTLNTVRAISGFSRDSNGNTWAVVAILNDPRPWGASAILDQVLLDLYRQPQAP
NSAVSIAQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatctttacggccattgcttcttgccagtcttcttttgccactggccttcggc
gccaacgccgcccctgtcaacacaacgctctcgcccaaagttcagcaagcactcaaaacc
aataaactgcagaacgacgcactatcattggtccttctgccgctcaacggcccgggcatt
ccaaccgtattcaatgccgatgtatccatgaacccggcctccaccatgaaactggtgacc
acttacgcggccctggaaatgctcggccccacccatcagtggaaaaccgagttctacaca
gatggcaccctgaacaacggcaccctgcaaggtaacctttacctcaagggcggcggcgat
cccaagctgaacatggaaaaactatggctgttgatgcgcgacctgcgcgccaatggcgtg
caacaggtaaccggcgacctggtacttgatcgcaacttcttcaatcaaccgcaattgccc
gtcttcaacgacgacggcaacgataaaaacaaacccttcctggtcaagcccgactcgctg
ctggtcaaccttaaagccttgcgcttcgtggcccgcaacgacgggggcaaagtcctgata
tcagtcgaaccaccgattgccagcatcaaaatcgacaatcaggtcaaggccgtcaatgcc
aagcaatgcaccggtgacgtgcgctacaacccggtaccccaagccgacggctcggtactc
gtcaccgtgagcggacagctggccgacggctgcaactcgcaaacctacttgtccctgctt
gatcacgcgacctacacagccggcgctgtacgcgccatctggaaagagctgggcggcagc
attcaaggccaggaccgccaggccagcgtgccgaagaactcgaaactgctggcacgggca
ttctctccggatctggccgaaatcattcgcgacatcaacaaatacagtaacaacaccatg
gcccagcagctgttcctgagcctgggcgcacagtttcgcaacgacgccgacggtgacgat
gccaaagctgcacagcgtgtagtacgccaatggctggccaaaaaaggcatcaccgcaccc
catctggtcatggaaaacggttccggcttgtcccgggccgaacgcgtgagcgcacgtgaa
atggcgcagatgctccaggccgcctggcaaagcccctacgctgccgaattcatcagctcc
atgccgattgccggcaaagacggcaccatgcgcaaacgcctgaaaaccaccgccatgaac
ggccaggctcacatcaagaccggcacactcaatacagtgcgcgccatttccggatttagc
cgcgacagcaacggcaatacctgggcggtggtcgccatcctcaacgaccctcgcccgtgg
ggcgcctcggccattctcgatcaagtgctgctcgatctgtatcgccagccacaagccccc
aacagtgcggtctccatagcccagtaa
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