Pseudomonas sp. ML2-2023-3: V6P94_10360
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Entry
V6P94_10360 CDS
T10712
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml00071
Fatty acid degradation
psml00280
Valine, leucine and isoleucine degradation
psml00310
Lysine degradation
psml00362
Benzoate degradation
psml00380
Tryptophan metabolism
psml00410
beta-Alanine metabolism
psml00640
Propanoate metabolism
psml00650
Butanoate metabolism
psml00907
Pinene, camphor and geraniol degradation
psml00930
Caprolactam degradation
psml01100
Metabolic pathways
psml01110
Biosynthesis of secondary metabolites
psml01120
Microbial metabolism in diverse environments
psml01200
Carbon metabolism
psml01212
Fatty acid metabolism
Module
psml_M00087
beta-Oxidation
psml_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
Enzymes [BR:
psml01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
V6P94_10360 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
V6P94_10360 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
V6P94_10360 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
V6P94_10360 (fadB)
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NCBI-ProteinID:
WWT73023
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Position
2222286..2224433
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVENFKLPDAELIAGNLEANRIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDAL
KVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASQCLIGLFLNDQEL
KKKAKIYDKIAKDVKQAAVLGAGIMGGGIVYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVENHVR
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEEDKRGKQ
KKIVDSSVLEVLKPIVYEQRDVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPLFRGGALRYIDSIGVAEFVALADQYAELGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttacggctcttgaaagtggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaaattcaaccgtctaaccctgaacgagttg
cgtcaggctgtagatgcgatcaaggcagatgcttcggtcaagggtgtcatcgtttccagt
ggtaaagacgtctttatcgttggcgccgacatcaccgagttcgtcgaaaacttcaagttg
ccggatgccgagctgatcgctggcaacctcgaagccaacaggatcttcagcgattttgaa
gacctcaacgtacccaccgtcgcggccatcaatggcatcgcgttgggtggcggtctggaa
atgtgtctggctgctgacttccgggtcatggcggacagcgccaaaatcggcctgccggaa
gtcaagctgggtatctatccgggctttggcggtaccgtgcgcctgccacgcctgattggc
gttgataacgcggttgagtggattgcctccggcaaggaaaaccgcgccgaagacgctctg
aaagtgagcgccgtagatgctgtggtaacggctgacaagctgggcgctgcagcgctggac
ctgatcaagcgcgccatcagtggcgagctggactacaaggccaagcgtcaacccaagctt
gaaaaactcaagctgaacgcaatcgaacaaatgatggctttcgaaaccgctaaaggtttt
gtggccggccaggctggcccgaactacccggccccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagtggaagcagcaggtttcgccaag
cttgcaaaaacctcagcttcgcaatgcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaagccaagatctacgacaagattgccaaagacgtgaagcaggcggccgttctg
ggcgcaggcatcatgggtggcggtattgtctatcagtcggcctccaaaggtacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcagggtctggccgaggctgccaagctg
ctggtaggccgcgttgataagggtcgcatgacaccggcgaaaatggctgaagtgctgaac
ggcattcgtcctactttgtcatacggcgatttcggtaacgtcgaccttgtggtcgaagcg
gtagtcgagaacccgaaggtcaagcaggctgtactggcggaagtggaaaatcacgttcgc
gaagacgccattctggcttccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgattcgtggcgagaagtccagcgacctggccgtagcaaccaccgttgcc
tatgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtcctgttcccgtacttcggcggtttcgccaggctggtcagcgccggtgtcgac
tttgtgcgtatcgacaaagtgatggaaaaattcggttggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccatggtcgcgacgttatggccgaaggcttc
ccggaccgtatgaaagacgaccgtcgttcagcgattgacgctttgtacgaggccaagcgc
ctgggtcagaagaacggcaagggcttctacgcctacgaagaagacaagcgcggcaagcag
aagaaaatcgttgattcgagcgtgcttgaggtcctcaagcctatcgtctacgagcagcgc
gacgtgaccgacgaagacatcatcaactggatgatgatcccgctgtgtcttgaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgcagccgaggctgacatgggcctggtctat
ggcattggcttcccgctgttccgtggcggcgcgctgcgctacatcgattcgatcggtgtt
gcagagttcgtggccctggccgatcagtacgctgaactgggcgcgctgtaccacccgact
gcgaagctgcgtgagatggccaagaacggccagagcttcttcggttaa
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