Pseudomonas sp. ML2-2023-3: V6P94_13550
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Entry
V6P94_13550 CDS
T10712
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psml Pseudomonas sp. ML2-2023-3
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psml03400
]
V6P94_13550
DNA repair and recombination proteins [BR:
psml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V6P94_13550
Archaeal homologous recombinant proteins
V6P94_13550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_21
AAA_29
AAA_15
ABC_tran
nSTAND3
MMR_HSR1
ABC_ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WWT69108
LinkDB
All DBs
Position
complement(2925330..2928971)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATADPRTLLRRGTGEGYAEVDFVGIDGRRYRARWEANRAREKA
TGKLQASRQSLRDLDNDQLLASQKGDYKVQLEARLGLNFEQFTRAVMLAQSEFSAFLKAD
DNERSELLEKLTDTALYTRLGKRAFDKAKEARDAHKQLQDQAVGVTPLEPQARAELDQQF
NDAQQQLKNQQGQLKQLEMQHTWLKTLGELQEQQLSAAEQLQQAQTLWDSQATQRQTLHL
LEKLAPQRHQFARLAELEGQLSPLAGHINAHLAQQAELGQRQTRLEAELQTARLAATQAQ
ALQRECAPQVQQALLEQANLNRLTQALNTQQTLQQQAEQACVEGQLALNTLLERQQQGAE
RLVLITTQLEHSNALAPLASAWDAYRPRLQQLVRLSNNLSTGRKELPGLEQRALQATQEL
TGLRDSLEILFQEAGAEPHAVNEQIQTLGSLLQDNRQQQRAFEDLQRLCSSQQALDSRLH
ELQLKQQEVQQERERLSQQGIKAKADLEVAEQTLQVTRQLLERQRVARSASVEELRGQLQ
DGQPCPVCGSAEHPYHQPETLLHSLSRHDEQEEASARAVVDGLKETLAQLREKVGGLIAQ
QKEFLLQQERIHQEQQALAPSLEAHPLHEQWLAQDPAKREQWLTLRLNQLQHSITQDEQR
QNALLALQKEAAHLQQQVQRCTEASQLATQQLAEQQLHLNADTQRLEDELGEFASVLAPA
TLDALRENPSACFMALDQQVADRVAQLDQQRDEQAEQAERASSIEREQYQQANRSKELGT
LQRSVKALGEQQQASQHSLKQWLGDFSSAEQWQQSLEHAVERARTAQTQAEQALQATANQ
LLQLATELKSEQERLHALQQEHDTLNAQLAQWRAQHSEVDDSRLQHLLAHDEAQVRELRL
HLQNSEKAVEQARVLLQEREQRLAQHQAHANGNLDSESLNIALEALHAQLAASEQQCAEL
RARQSEDQRRQQANQALAQRIALAYDEWQRWARLSDLIGSGSGDKFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIQV
KRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccattcgcctgaaaaacctcgcctcactggccgggccctttgagctg
gatttcaccgccgagcccctggccagtgccgggttgtttgcgatcaccggccccaccggc
gccggcaaaagcaccctgctcgacgccctgtgcctggccctgtttggggctgtgccgcgc
ctcaacaacacggggcgcgatgcaaaagtgccggatgccgacggcgaaattgccaccgcc
gacccgcgcacattgctgcgccgtggcaccggcgaaggctatgccgaagtcgattttgtc
ggcatcgacggccgccgttaccgcgcccgctgggaagccaaccgcgctcgcgaaaaagcc
accggcaagctgcaagccagtcgccaaagcctgcgcgacctggacaacgatcaactgctg
gcgagccagaaaggcgattacaaagtccagctggaagcgcgactggggctcaatttcgag
caattcacccgtgccgtgatgctggcccagagtgagttcagcgcctttctcaaggccgat
gacaacgagcgcagcgaactgctggaaaaactcaccgacaccgcgctctacacccgcctg
ggcaagcgcgcattcgacaaggccaaagaggccagggacgcgcacaagcaactgcaggac
caggctgttggtgtgacgccccttgagccccaggcccgtgccgaactggatcaacagttc
aacgacgcgcagcagcagctaaagaaccagcaaggccagctcaagcagctggagatgcaa
cacacctggctcaaaaccctgggcgaactgcaagagcagcaactcagcgctgcggagcaa
ttacagcaagcgcaaaccctgtgggacagccaggccacccagcgccagaccctgcacctg
ctcgaaaaactggcaccacaacgtcatcagtttgcccgcctggccgagctggaagggcaa
ctgagcccattggccgggcacatcaacgcccatcttgctcaacaggccgaactgggccag
cgccagacccgccttgaagcagagctgcaaaccgcccgcctggctgcaacccaggcccag
gcccttcagcgcgaatgcgcgccccaggtgcagcaggcccttctggagcaggccaacctt
aaccgcctgacccaggccctcaacacccaacaaaccctccagcagcaggccgaacaggcg
tgcgtcgaagggcaactggcgctcaacacgctgcttgagcgccagcaacaaggcgctgag
cggcttgtactcatcaccacccagctcgaacacagcaatgccctcgcaccactggccagc
gcctgggacgcctatcgcccaaggcttcagcaactggtgcggttgagcaataacttgagc
accggccgcaaggagctgccggggcttgaacagcgggccctgcaggccacgcaggaactg
accgggttgcgcgacagcctggaaattttgttccaggaagccggcgcagaaccccacgcg
gtcaacgagcaaatccagaccctgggcagcctgctgcaagacaaccgtcagcaacagcgg
gcctttgaagacctgcagcgcctgtgcagcagtcagcaagcgctcgatagccgcctgcac
gaactgcaactcaagcaacaggaggtgcagcaggagcgcgagcgcctgagccagcaaggc
atcaaggccaaagccgaccttgaagtggctgagcaaaccttgcaggtcacccgccaactg
ctggagcgtcagcgcgtggcccgtagcgccagcgttgaggaactgcgcgggcagctgcag
gatggccagccctgcccggtgtgcggcagcgccgagcatccgtatcatcagcctgaaacc
ttgctgcacagcctgtcccgccatgatgagcaggaagaagccagtgcccgcgccgtagtc
gacgggctcaaggaaaccctcgcccagctgcgggaaaaagtcggtggcctgatcgcccag
caaaaagaatttttgctccagcaagagcgcatccaccaagaacagcaggccctcgccccg
agccttgaagcgcatccgctccacgagcaatggctggcacaggacccggccaagcgtgag
caatggctgacccttcgcctgaatcagttgcagcacagcatcacccaggacgaacagcgc
cagaacgccctgctcgccttgcaaaaagaagcggcccacttgcagcagcaagtccagcgc
tgcaccgaagccagccagctcgccacccagcaactggctgagcagcaattgcacctcaat
gccgacactcagcgccttgaggatgaactcggcgagtttgccagcgtgctggccccggcc
accctcgacgccctgcgcgaaaacccgtccgcctgcttcatggccctcgaccagcaagtg
gctgatcgtgtggcccaactcgatcagcaacgggacgaacaggcggagcaggctgaaaga
gcgagcagcatcgagcgcgagcagtatcagcaggccaatcgcagcaaggaactgggcacc
ttgcagcgcagcgtcaaggcgctgggcgagcagcaacaggccagccagcacagcctcaaa
caatggctgggtgacttcagcagcgccgagcagtggcagcaaagcctcgagcatgccgtc
gaacgggcccgcacggcccagacccaggccgaacaagccctgcaagctaccgccaaccag
ttgctccagctcgcgaccgagctcaagtccgagcaagagcgcctgcacgccctgcagcaa
gaacacgacaccctaaacgcccagctcgcgcaatggcgggcacagcacagcgaggtcgat
gacagtcgcctgcagcacttgctggcccatgacgaagcacaggtacgcgaactgcgcctg
cacctgcagaacagcgaaaaagccgtcgagcaagcccgggtattgctgcaagaacgcgaa
caacgcctggcccaacaccaggcccatgccaatggcaacctggacagcgagtcactcaac
atcgcccttgaggcgttgcacgcacaactggctgccagtgagcagcaatgtgccgaacta
cgtgcccggcagagcgaggatcaacgtcgtcaacaggccaatcaggcattggctcaacgc
attgcactggcctatgacgaatggcagcgctgggcacgcctcagtgatctgatcggttcc
ggcagtggcgacaagttccgcaaaatcgcccaggcctacaacctcgacctgttggtccat
cacgccaacgcgcagttgcgccaactggtccgccgttatcgcctcaagcgcggtggcagc
atgctcggcctgctggtgatggacaccgagatgggcgacgaactgcgctcggtgcattcg
ctttccggcggtgaaaccttcctggtgtcgctggcattggccctgggcctggcctcgatg
gcctccagcacattgaaaatcgaatcactgttcatcgatgaaggttttggcagcctcgat
cccgagtccctgcaactggcgatggatgcactggacggcctgcaggcccaggggcgcaag
gtgggggtcatctcccacgtacaggagatgcacgaacgcatcccggtccagatccaggta
aaacgtcaaggcaacggtttgagcaccgtggaggttaaatga
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integrated database retrieval system
