KEGG   Pseudomonas sp. ML2-2023-3: V6P94_19005
Entry
V6P94_19005       CDS       T10712                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
psml  Pseudomonas sp. ML2-2023-3
Pathway
psml00010  Glycolysis / Gluconeogenesis
psml00020  Citrate cycle (TCA cycle)
psml00260  Glycine, serine and threonine metabolism
psml00280  Valine, leucine and isoleucine degradation
psml00310  Lysine degradation
psml00380  Tryptophan metabolism
psml00620  Pyruvate metabolism
psml00630  Glyoxylate and dicarboxylate metabolism
psml00640  Propanoate metabolism
psml00670  One carbon pool by folate
psml00785  Lipoic acid metabolism
psml01100  Metabolic pathways
psml01110  Biosynthesis of secondary metabolites
psml01120  Microbial metabolism in diverse environments
psml01200  Carbon metabolism
psml01210  2-Oxocarboxylic acid metabolism
psml01240  Biosynthesis of cofactors
Module
psml_M00009  Citrate cycle (TCA cycle, Krebs cycle)
psml_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psml_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
psml_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
psml_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:psml00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    V6P94_19005 (lpdA)
   00020 Citrate cycle (TCA cycle)
    V6P94_19005 (lpdA)
   00620 Pyruvate metabolism
    V6P94_19005 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    V6P94_19005 (lpdA)
   00640 Propanoate metabolism
    V6P94_19005 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    V6P94_19005 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    V6P94_19005 (lpdA)
   00310 Lysine degradation
    V6P94_19005 (lpdA)
   00380 Tryptophan metabolism
    V6P94_19005 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    V6P94_19005 (lpdA)
   00670 One carbon pool by folate
    V6P94_19005 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psml04147]
    V6P94_19005 (lpdA)
Enzymes [BR:psml01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     V6P94_19005 (lpdA)
Exosome [BR:psml04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   V6P94_19005 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA HI0933_like NAD_binding_8 FAD_oxidored DAO UDPG_MGDP_dh_N AlaDh_PNT_C FAD_binding_3 FAD_binding_2 3HCDH_N
Other DBs
NCBI-ProteinID: WWT70093
LinkDB
Position
4148155..4149543
AA seq 462 aa
MQPTQHTTLLIIGGGPGGYVAAIRAGQLGIPTVLIEGQSLGGTCLNVGCIPSKALIHVAE
QFHTTQRYSTNNSPLGIKTQAPTLDIGQSVQWKNGIVDRLTSGVGALLKKHGVKVIHGWA
RILDGKAVEVDGQRIECEHLLLATGSQTVDLPILPIGGAIISSTEALQPTAIPKRLTVVG
AGYIGLELGIAYRKLGAEVTVVEARDRILPTYDKDLTLPVAESLKALGITLYLSHSVEGF
QASTKTLSMRNAMGESQTLETDQVLVAVGRRPRTQGFNLETLALAMNGPAIRVDNRCHTS
MRNVWAIGDLTGEPMLAHRAMAQGEMVAEIIAGKQREFSPTAIAAVCFTDPEIVVVGKTP
AEAEAAGLDFISATFPFSANGRAMTLESKTGFVRVVARRDNHLIVGWQAVGAGVSELSTA
FGQSMEMGACLEDIAGTIHAHPTLGEAVQEAALRALGHALHL
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgcagccaacacaacacaccacgctgctgattatcggtggcggccctggcggctatgtc
gcggcgatccgtgccggtcagctggggatcccgacggtcctgatcgaaggccagtccctg
ggcggcacctgccttaacgtcggctgcattccgtccaaggcgttgattcacgttgccgag
cagttccataccacccagcgctacagcaccaacaactcgccgctggggatcaagacccag
gcaccgaccctggacatcggccagagcgtgcaatggaaaaacggcatcgttgatcgcctc
acctccggcgtgggcgcactgcttaaaaagcatggcgtcaaggtgatacacggctgggcc
aggatcctcgacggcaaggccgttgaagtcgacggacagcgcatcgaatgcgaacacctg
ctgctggctaccggctcgcagaccgtcgacctgccgatcctgcccattggcggagcgatt
atttcgtccaccgaagccttgcagcccaccgccattcccaagcgcctgaccgtggtcggg
gccggatatatcggtctggaactgggtatcgcctaccgcaagctcggcgccgaagtcacc
gtggtcgaggctcgtgaccgaatcttgccgacgtacgacaaggatctcacgctgccggtg
gccgaatccctcaaggctctgggcataaccctgtacctgtcccacagtgtcgagggtttc
caggccagcaccaaaaccctttccatgcgcaacgccatgggcgagagccagaccctggaa
accgatcaggtgctggtggctgtcggccgtcgtccgcgcactcagggcttcaaccttgaa
accctggcactggccatgaacggcccggccattcgcgtcgacaaccgttgccacaccagc
atgcgcaacgtgtgggcgattggcgacctgaccggcgaaccgatgctggctcatcgggca
atggcacagggcgaaatggttgccgagatcattgccggtaaacagcgcgagttcagcccc
acggccatcgctgccgtgtgctttaccgatccggaaatcgtcgtggtgggtaaaaccccg
gcagaagccgaggcggcgggactggactttatcagcgccacctttccgttctcagccaat
gggcgggccatgaccctggaatccaagaccgggtttgtgcgggtcgtggcgcgccgtgac
aaccacctgatcgtcggctggcaagctgtgggtgcgggggtttcggagttgtcgactgcc
tttggccagtcaatggaaatgggcgcctgcctggaagacattgcaggcaccattcacgcc
cacccgacactgggtgaagccgtgcaagaagccgccctgcgcgcattggggcatgcgttg
catctgtaa

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