Pseudomonas sp. ML2-2023-3: V6P94_20650
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Entry
V6P94_20650 CDS
T10712
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml03030
DNA replication
psml03430
Mismatch repair
psml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6P94_20650 (dnaQ)
03430 Mismatch repair
V6P94_20650 (dnaQ)
03440 Homologous recombination
V6P94_20650 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psml03032
]
V6P94_20650 (dnaQ)
03400 DNA repair and recombination proteins [BR:
psml03400
]
V6P94_20650 (dnaQ)
Enzymes [BR:
psml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6P94_20650 (dnaQ)
DNA replication proteins [BR:
psml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6P94_20650 (dnaQ)
DNA repair and recombination proteins [BR:
psml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6P94_20650 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WWT70400
LinkDB
All DBs
Position
complement(4478581..4479339)
Genome browser
AA seq
252 aa
AA seq
DB search
MRSVVLDTETTGMPVTDGHRVIEIGCVELMGRRLTGRHFHVYLQPDRESDEGAIGVHGIT
NEFLVGKPRFAEVADEFFEFIKGAQLIIHNAAFDVGFLNNEFALIGQTDRADLTRHCTIL
DTLAMARARHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTSLSLA
GNASDGNGSGEGSGNQASEIRRLSADRHPGRIIRASESDLAEHAARLEAIAKSAGAPSLW
TQLLDAKGQTLQ
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagtgttgtactggataccgaaaccaccggtatgccggtcaccgacggccaccgc
gtgatcgagatcggttgcgtcgagttgatgggacgtcgcttgaccggcaggcattttcac
gtgtacctgcagcccgaccgcgaaagtgacgagggcgccattggcgtccacggcattacc
aatgagtttctggtgggcaagccccgttttgctgaagtggccgatgagttttttgaattc
atcaagggcgctcagttgatcattcataacgccgcgtttgacgtgggctttttgaataac
gagtttgccctgatcgggcagacggatcgggccgatctcactcgccactgcacaatcctc
gataccctggcgatggcgcgggcccgtcacccggggcagcgcaacagccttgatgccttg
tgcaaacgctatggcgtcgataactcgggtcgtgaattacacggcgcgttgctcgactcc
gagatcctggcagacgtttatctgaccatgaccggtggtcaaaccagcctgtcactggcg
ggcaatgcttctgacggcaatggttcgggcgaaggctcgggcaatcaggccagtgaaatt
cgccgcttgtcggcagaccgtcatccgggtcggattattcgtgcaagtgaaagcgacttg
gccgagcatgcggctcgtcttgaagccattgccaaatcggctggcgccccttcgttgtgg
acccaactcctcgacgccaagggacagacgctgcaatag
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