Pseudomonas sp. ML2-2023-3: V6P94_21065
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Entry
V6P94_21065 CDS
T10712
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
psml Pseudomonas sp. ML2-2023-3
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psml03400
]
V6P94_21065
DNA repair and recombination proteins [BR:
psml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
V6P94_21065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_16
ResIII
TrwB_AAD_bind
T2SSE
AAA_10
nSTAND_NTPase5
AAA_30
AAA_7
P-loop_TraG
Hydrolase
CbiA
AAA_19
SRP54
nSTAND3
AAA_6
DUF8589
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WWT70470
LinkDB
All DBs
Position
complement(4565496..4566980)
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AA seq
494 aa
AA seq
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MPDSSALVLGADLSGQPIAQSLRLANRHGLVAGATGTGKTVTLQRLAEQFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKIAERIAGMPWLNYQPKAYPVTLWDIQGKTGHPLRTTLSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLRDNPQILGDDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPASDGRGQIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFAGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPADLPDTVLAQLGLRIQHGLRAFTAKEQKSLKAVADGFRPNPAFNALAVLTEL
GTGEALVGMLEEKGTPAMVQRVLIAPPQSRIGPLTEAEREALIRGSALLGRYDKPVDRES
AYEILMARKGVAPQDQTQTQAAPHEPGFLDQAGDFLGSTAGKALQSMARQAASQMGRQLV
RGLLGSLLGSSKRK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcttctgctctagtacttggtgccgacctttcgggtcagcccatcgctcag
tccttgcgccttgccaaccggcacgggctggtggcgggtgccacggggacgggtaaaacc
gtgactctccaacgtttggccgaacagttcagcgatgccggagttgcagtctttgccgct
gacatcaagggcgatctgtgcggtttgggcgcggctggcaacccccaggggaaaatcgcg
gagcggattgcgggaatgccgtggctcaattaccagcccaaggcgtatccggtgaccttg
tgggatatccagggcaagaccggtcatccgttgcgtacaaccttgagtgaaatgggaccg
ttgctgttaggcagcctgctggagctgaccgatagccagcagtcggcgctctatgcagcc
ttcaaggtggcggatcgtgaagggttgttgttgctcgacctcaaagacctgaaggcgctc
ctcaatcatctgcgtgataaccctcaaatattgggcgatgacgccgccctgatgaccacc
ggctcaagtcaggccctgttgcggcgtctggcaaccctcgaacagcagggtgctgaagcc
ctgttcggggagccggcactgcaactcgaagatattttgcagcctgccagtgacggtcgc
gggcagattcatctgcttgatgccagtcgcttggttcatgaagcgccaaaggtgtacgca
acctttctgctgtggctgttggcggagcttttcgagcaactgcccgagcgcggcgacgcg
gacaaacccctgctggcgctgttttttgacgaggcgcacctgctgtttgccgggacgcca
aaagcgttgcaggatcgcttggaacaagtcgtacgcctgatccgttccaaaggtgtcggg
gtgtattttgtcactcaatcgcctgcggacttgccggatacggtgctcgcgcagttgggg
ctgcgtatccagcatggcctgcgggcctttacggccaaggagcagaagtccctgaaggcc
gtggctgacggatttcgtccgaatccggcgtttaatgcgttggcggtactgacagagctg
ggtacaggggaggcgctggtgggcatgcttgaagaaaaaggcacgccagccatggtccag
cgcgtactgattgcgccaccgcaatcgcgtattggtccgttgactgaagccgagcgcgag
gccttgattcgcggttctgcgctgctggggcgatacgacaagcctgtggatcgggagtcg
gcgtacgagattctcatggcccgcaagggcgtggcgccgcaagaccagacgcagacacag
gctgcgccgcacgagccggggtttctggatcaggcgggagactttctgggctcgaccgca
ggcaaggcgctgcagtcgatggcgcgccaggcggccagccagatggggcgccagttggtt
cgggggctgctggggtcgttgttgggcagcagcaagcgcaagtga
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