Pseudomonas sp. ML2-2023-3: V6P94_22870
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Entry
V6P94_22870 CDS
T10712
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6P94_22870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psml03021
]
V6P94_22870
Transcription machinery [BR:
psml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6P94_22870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
GerE
HTH_20
HTH_38
Xre-like-HTH
HTH_40
HTH_31
HTH_28
HTH_11
HTH_Crp_2
PhyR_sigma-like
HTH_10
HTH_AsnC-type
TnsD
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WWT70805
LinkDB
All DBs
Position
4957798..4958286
Genome browser
AA seq
162 aa
AA seq
DB search
MSQSNTVEVLYQDHHSWLTGWLRRKLGCPQSAADLAQDTFMRLLTARETPTLAEPRAFLT
VVAKRVLFNHYRRQDLERAYLQALAQMPEQVVPSEEERAIILQTLMELDQLLDGLPSPVK
RAFLLAQIDGLSHAEIGARLGISVATVKRHLSKAALRCYFAL
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcagtcaaacaccgtcgaggttctgtatcaggaccaccacagctggctcacgggc
tggttgcggcgcaagctgggttgcccgcaaagcgccgccgacctggcccaggacacgttc
atgcggctgctgaccgcccgcgaaaccccgaccctggccgaaccccgggcttttttgacg
gttgttgccaaacgtgtgttgttcaatcactaccgccgccaggatctggagcgcgcctat
ctgcaggcgctggcccaaatgccggaacaggtggtccccagcgaagaagaacgggcaatc
atcctgcaaaccctgatggaactggatcagttgctcgacggtttgccctccccggtcaag
cgcgcctttctgctcgcccagatcgacggcctgagccacgccgaaatcggcgcccggctg
ggcatttcggtcgccaccgtcaaacgccatctaagcaaggcggccctgcgctgctacttc
gccctgtga
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integrated database retrieval system
