Pseudomonas sp. ML2-2023-3: V6P94_23485
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Entry
V6P94_23485 CDS
T10712
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6P94_23485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psml03021
]
V6P94_23485
Transcription machinery [BR:
psml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6P94_23485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
HTH_31
MerR
Rv2175c_wHTH
MerR_1
HTH_3
KORA
HTH_AsnC-type
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
WWT70922
LinkDB
All DBs
Position
5069535..5070059
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AA seq
174 aa
AA seq
DB search
MAQIALASANARQTVLHSLFGDHHGWLLNRLRARLGCSHDAADIAAEVFVQVVALPEPQA
IREPRALLTTIAKRLMYDSWRRRDLERAYLEVLALQPEAFEPSPEVRALAIEALLEIDAL
LSGLSSRARTAFLCSQVDGMKYADIAELIGVSTTRVRQYEAKGLKLCCQNLIHE
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcgcgctcgcttctgccaatgcacgacagacggtattgcacagccttttc
ggtgaccaccatggttggttgttgaatcgactacgtgcgcggctgggctgttcccatgat
gctgcagacatcgctgctgaagtgtttgttcaggttgtcgcattacctgaaccgcaggca
atccgcgaacctcgggcactccttacgacaatcgccaagcgattgatgtacgacagttgg
cgcaggcgcgatctggaacgcgcttatctggaagtgttggctttgcaacccgaagcattc
gaaccctcccctgaagtccgggcactggcgattgaagctttgcttgaaatcgacgcctta
ctctcaggcctttcgtcacgggcccgcactgcatttctgtgcagccaggtggacggtatg
aagtacgccgacattgccgagttgataggggtatcgacaactcgggtacgccaatatgaa
gccaagggtttgaagctgtgctgccagaatctgattcacgagtga
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