Pseudomonas sp. ML2-2023-3: V6P94_23720
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Entry
V6P94_23720 CDS
T10712
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml00550
Peptidoglycan biosynthesis
psml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6P94_23720 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psml01003
]
V6P94_23720 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
V6P94_23720 (mrcB)
Enzymes [BR:
psml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
V6P94_23720 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V6P94_23720 (mrcB)
Glycosyltransferases [BR:
psml01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
V6P94_23720 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
V6P94_23720 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
PBP1_TM
Motif
Other DBs
NCBI-ProteinID:
WWT70959
LinkDB
All DBs
Position
complement(5123619..5125943)
Genome browser
AA seq
774 aa
AA seq
DB search
MTRTRSPRSRSKRPSGGLRPWLGWAIKLSLVGLVVLAGFAVYLDAIVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKNDFLTELDALGYRRESVANGPGAAAVNGNTVDLNTRGFQFYEG
AEQAQPVRVRFSGDYVAELSSTNGSKLPVVRLEPLLIGGLYPKNLEDRILINIDQVPPFL
LETLVTVEDRDFYHHFGVSPKSIARAMWVNTSAGQMRQGGSTLTQQLVKNFYLTNERSLS
RKLTEAMMALLLEMHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLAELKLH
QVALLVGMVKGPSAYNPRRYPERALVRRNLVLDLLEQQGVATSEQVAAAKKMPLGVTTRG
SLADSSFPGFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKSEAAMGETFKRLTGR
KGSDEVEAAMVVTNPETGEVQALIGSRAPRFAGFNRALDAVRPIGSLIKPAVYLTALERP
SQYTLTSWLSDDPLSIKGADGQVWKPQNYDRRSHGTVFLYQSMMNSYNLGTVRLGQEVGV
PNVLKTLARLGVERQFPAFPSMLLGAGALSPMEVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDPGSIFLIQNAMQHVMREGTGRSVYNVLPRNLALAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMKKADPLPLDMPQPDNIVQA
WIDPHTGQGSDASCPGAVQMPYIRGSEPPAGTSCGGQAPASGEAVMDWVKGWLN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtacccgatctcctcgttctcgttccaaacgtccttctggcggccttcggccc
tggctgggctgggcaatcaagctcagtctggtcggtctggtggtgctggcaggttttgcc
gtctatctggatgccatcgtgcaggagaagttctccggcaagcgctggaccatcccggcc
aaggtttatgcccggccgctggagctgttcgtcggccagaagctgagcaagaatgacttc
ctcacggagctcgatgcgctgggctaccgccgtgaaagcgtggccaatggccctggtgcc
gcagcagtcaatggcaacacggtcgacctcaatacccgtggcttccagttttatgaaggt
gctgaacaggcacagccggtacgtgtacgtttttctggtgactatgtagcagagctgtca
tcgaccaatggttccaagctgcctgtggtgcgccttgagccgttgctgatcggtggcctc
tatccgaaaaacctcgaagaccggatcctgatcaatatcgatcaagtgccgccgtttctg
cttgaaacgctggtaacggtagaggatcgcgatttttatcatcactttggcgtgtcgcca
aagtcgatcgcacgtgccatgtgggtcaatacctcggccgggcaaatgcgtcagggcggc
agcacattgactcagcagttggtcaagaacttctacctgaccaacgagcgcagtctgagc
cgcaagttgactgaagcgatgatggccttgttgcttgagatgcattacgacaagcgcgaa
atccttgaggcatatctcaacgaagtgtttgtaggtcaagacggtcaacgggctgttcat
ggctttggcctggccagtcagttcttcttcagccagccgctggccgagctcaagttgcat
caagtggcgctgctggtaggcatggtcaaagggccatctgcctacaatccgcgacgctac
cctgagcgagcgcttgttcgccgtaatctggtactcgacttgcttgagcagcaaggtgtt
gcaacgtctgagcaagtggctgctgccaagaaaatgccactgggcgtgaccacgcgtggc
agtctggcagacagctcgttcccgggttttctggatctggtaaagcgtcagttacgtgaa
gattatcgagatgaagacttgaccgaagaggggttgaggatttttaccagcttcgacccg
atcctgcagatgaagtctgaagccgcaatgggtgagaccttcaagcgtctgaccgggcgt
aagggttcggatgaagtggaagccgcaatggtggtcacgaatcccgaaaccggtgaggtt
caggccctgatcggcagccgtgcaccgcgctttgcaggttttaaccgtgccctggatgcg
gtacggcccatcggttcgttgatcaagcctgcggtgtatctcacggcgcttgagcggccg
agtcagtacacgctgaccagttggctgtcagatgatccgttgtcgatcaaaggcgcggac
ggtcaggtctggaagcctcagaactatgaccggcgttctcatggcacggttttcctctac
cagtcgatgatgaactcctacaacctgggtactgtaagactggggcaggaagtcggcgtg
cctaatgtgctcaagaccttggcgcgactgggggttgagcgtcagttcccggcgttcccg
tccatgttgctgggtgccggtgcattgagcccgatggaagtggcgaccatgtatcagacc
ttggccaacggcggctttaatacgccgatgcgcgggattcgcagtgtactgacagcagaa
ggcgagccactcaagcgctatccgttccagatccagcaacgcttcgatccgggttctatc
ttcctgatccagaatgcgatgcagcatgtaatgcgcgaaggtacggggcgttcggtttat
aacgtactgcccaggaatcttgcgttggcaggcaagaccggtaccagtaacgattcgcgt
gacagctggttcgcaggttttagtcaggacttgctggcagtggtctggctgggtcgcgac
gacaacggcaaaacgccgtttaccggcgcaaccggtgctctgcaagtgtggaccagcttt
atgaagaaagctgacccgctgccgctcgatatgcctcagcccgataacattgttcaggcc
tggattgatccgcatacgggtcaaggatctgacgccagctgccctggcgcggtacagatg
ccgtatattcgcggcagtgagccgccagcggggaccagttgtggcgggcaggcgcctgct
tcaggtgaggccgtgatggattgggtcaagggctggttgaattaa
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