Pseudomonas sp. ML2-2023-3: V6P94_23850
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Entry
V6P94_23850 CDS
T10712
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psml Pseudomonas sp. ML2-2023-3
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psml03016
]
V6P94_23850 (truB)
Enzymes [BR:
psml01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V6P94_23850 (truB)
Transfer RNA biogenesis [BR:
psml03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V6P94_23850 (truB)
Prokaryotic type
V6P94_23850 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WWT70984
LinkDB
All DBs
Position
complement(5156550..5157467)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLLTRPVTVGRADIEAVLPSFRGKIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTITRLELLASEGDTARLAVDCTKGTYI
RTLVEDIGEQLGCGAYVAELRRTHAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
cttggattcacttccaacgcggccctgcagaaagttcgctggctgctcaatgccgagaag
gcagggcacaccggtagcctagatccattggccagcggtgtcttgccgttgtgctttggc
gaagccaccaagttttcgcaatacctgctcgattccgacaagggttatgaaaccctgatg
caattgggcaagaccaccacgactgcagatgctgaaggcgatgttttgctgacacgtcca
gtgaccgttggtcgcgccgatatcgaagctgttttgcctagttttcgtgggaaaatcagt
cagataccgccgatgtactctgcactcaagcgagacggacagccgctttacaagttggcc
cgtgcaggcgaagtggtggagcgtgaaccacgttctgttactattacccgcctcgaattg
ctggccagcgaaggtgacactgcgcgcttggccgtcgactgcaccaaaggcacctatatc
cgtaccctcgtggaagatatcggtgagcaactgggttgcggtgcatacgttgcagagctg
cgtcgtacacacgctggacctttcagcctggcccaaacggtgacgctggaagagttggaa
gctgtgcatgccgaaggcggcaacgaagcggttgatcgcttccttatgccatcggacagt
ggcttgctggactggccattactgcacttctcggaacacagtgcgttctattggctcaat
ggccaaccggttcgtgctcctgatgccccgaagttcggtatggtacgagtacaagatcac
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcggaatga
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