Pseudoalteromonas sp. MM1: PspMM1_02010
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Entry
PspMM1_02010 CDS
T09926
Name
(GenBank) porin
KO
K03286
OmpA-OmpF porin, OOP family
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psmm02000
]
PspMM1_02010
Transporters [BR:
psmm02000
]
Other transporters
Pores ion channels [TC:
1
]
PspMM1_02010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
Porin_4
Motif
Other DBs
NCBI-ProteinID:
BED87733
LinkDB
All DBs
Position
1:219287..220345
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AA seq
352 aa
AA seq
DB search
MKLKSLTIAIALAATSASTFAADKEEGFYIGAFGDYYDASWENMRAQAGLDVNESTGWGV
EAGYRFSDYWSARLEYADMDFNAFDKAAGNRNNIDGERYGIDALYHLDGGPFYGLFGIKE
MDVVDDNTFLNAGVGYQHFITDGFFVNAETAVYQGLDKGYTDVGAKIGINYLFGQNSMPE
KPVEPAPTAVVEVPVQPKDSDNDNILDKDDKCPNTPMTDAVDGDGCTLYEDREVTTSLLV
TFPHDSAEVGSQYFTDIASVSEFLKEHTDTTVLLEGHASAVGNANYNKMLSKKRADDVAK
ELIKDGIAEDRITTVGLGEERLKNTANTKAAHAENRRVEAHVKSIERVKVKR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaatcacttacaattgcaattgcgttagctgcaactagcgcgtctacattc
gctgccgataaagaagaaggtttctacattggtgcatttggtgactactatgatgcgtca
tgggaaaacatgcgcgctcaagctggccttgatgtaaacgagtcaactggctggggtgta
gaagcaggttaccgtttcagcgattactggagcgcacgccttgagtatgcagatatggac
tttaatgcgttcgataaagctgcgggaaatcgtaataatattgacggcgagcgttacggt
attgatgcgctttaccaccttgacggcggtcctttctacggcttgttcggtattaaagaa
atggacgtagtcgatgacaacacattcttaaacgcaggtgttggttaccaacactttatt
acagacggctttttcgtaaacgctgaaactgcggtatatcaaggtcttgataaaggttac
acagatgtaggtgctaaaattggtattaactacttatttggccaaaactctatgcctgaa
aagccggtagagccagcgcctacagcagtagtagaagtacctgtacaacctaaagacagc
gacaacgacaacatcttagataaagatgataaatgtcctaacacaccaatgacagacgct
gttgatggcgatggctgtactttatatgaagaccgtgaagtaacaactagcttactcgtt
actttcccgcatgattcagcagaagttggttcacagtactttactgatatcgcttcagta
tctgagttcttaaaagagcacacagatacaacagtactacttgaaggtcatgcttcagct
gtaggtaatgcaaactacaacaagatgctttctaaaaagcgtgctgatgacgttgctaaa
gagctaattaaagatggtattgctgaagatcgcattactactgtaggtttaggtgaagag
cgtcttaaaaacacagctaacactaaagcagctcacgctgaaaaccgtcgtgtagaagca
catgtaaaatctattgaacgtgtaaaagttaagcgttaa
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