Pseudoalteromonas sp. MM1: PspMM1_02840
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Entry
PspMM1_02840 CDS
T09926
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03030
DNA replication
psmm03410
Base excision repair
psmm03420
Nucleotide excision repair
psmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PspMM1_02840 (polA)
03410 Base excision repair
PspMM1_02840 (polA)
03420 Nucleotide excision repair
PspMM1_02840 (polA)
03440 Homologous recombination
PspMM1_02840 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmm03032
]
PspMM1_02840 (polA)
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_02840 (polA)
Enzymes [BR:
psmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PspMM1_02840 (polA)
DNA replication proteins [BR:
psmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PspMM1_02840 (polA)
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PspMM1_02840 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PspMM1_02840 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
BED87816
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All DBs
Position
1:326537..329266
Genome browser
AA seq
909 aa
AA seq
DB search
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVVNMLKSLIKQYDPSHMVV
VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPLHSIIKAMGFPLISIEGVEADDVIGT
FSRIATEQKRHVLVSTGDKDMAQLVNEHVTLINTMTDSISDPQTVVEKFGVGPELIIDYL
ALMGDKVDNIPGVEGCGPKTAVKWLQKYGSLQGVIDNAGDIKGKIGEKLANALDHLPLSY
ELATIKCDVEVESDLDTFKLQEPNKDELITLYGECEFRRWLAELLDNPKDAEKAVPTQAN
ELPQVEDAHYETILSESQFDALIEQLNNAELFAFDTETTSLDYMQAQLVGMSFAVKAGEA
AYLPIAHDYPGAPEQLSLEYVMQKLGPILADANKAKVGQNLKYDKSVLANAGYELNGIKF
DTMLESYVFNSVGTRHDMDSLALKYLGHKNISFEDIAGKGKKQLTFNQIELEQAAPYAAE
DADITLRLHQVLWPKLEADEKLKSVFETIEMPLVNVISDIERTGVAIDSNMLAAHSQRLG
ERLLELEKEAFEIAGEPFNLSSPKQLQVLLFEKLELPVIKKTPKGAPSTAEEVLQELAHD
YPLPKVIIEHRGLSKLKSTYTDKLPLMVNEKTQRVHTSYHQAVTATGRLSSTDPNLQNIP
IRSEEGRRIREAFVAAPGYKIVAADYSQIELRIMAHLSQDKGLLNAFANGLDVHSATAAE
VFGVELDEVTTDMRRKAKAVNFGLIYGMSAFGLARQLDVPRHEAQHYIDKYFERFPGVLE
YMETTREKAAENGYVETIFGRRLHLPEINARNGARRKGAERAAINAPMQGTAADIIKKAM
LSVHSWVNEQAPNTIKLLMQVHDELVFEIKTDCAQAYTKQICELMSQAASLDVPLIVEAD
EGENWEQAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccccgaaaacccgctaattttagttgatggctcatcatatttatttcgc
gcttaccattctccaccgcacctaaccaattctaaaggtgaagcaacaggtgctatttat
ggcgtggtaaacatgcttaaaagtttgatcaaacaatatgatccgagccacatggtggtg
gtgtttgatgccaaaggcaaaacgttcagaaacgacatgtatagcgagtataaagctaat
cgtccgccaatgcctgacgatttacgaacgcaaatagcgccattacacagcattattaaa
gcaatgggctttccgctaattagtattgaaggtgttgaagccgatgatgttattggtacg
ttttcgcgtatagcgactgagcaaaagcgccatgtattggtttctacaggcgataaagac
atggctcagctagttaacgagcatgtgacgctaataaacaccatgaccgacagcatttca
gatcctcaaactgttgttgaaaaatttggtgtgggtcctgagctaattatcgactattta
gcgttaatgggtgataaggttgataacatcccaggtgttgaagggtgtggacctaaaaca
gctgttaaatggctgcaaaaatatggatcgctccaaggtgtcattgataatgccggcgac
attaaaggcaagattggtgaaaagctagcaaatgctcttgatcacctaccacttagttat
gagcttgccaccattaaatgtgatgttgaggtagagtcagacctagatacctttaaatta
caagagccaaataaagatgagctgattacactgtatggtgagtgtgagttccgccgctgg
ttagctgagctacttgataatccaaaagatgcagaaaaagcagtgcctacacaagcaaat
gagctgccacaagtagaagacgctcattatgaaactattttaagcgagtcacagtttgat
gcgcttatagagcagttaaataacgctgagttatttgcctttgataccgaaacaaccagc
cttgattacatgcaagcgcagttagtaggtatgagctttgctgtaaaagcaggcgaagca
gcttacttacctattgcacacgactacccgggtgcaccagagcaattaagccttgaatat
gtaatgcaaaagcttgggccaatcctcgccgatgctaacaaagctaaagtagggcaaaac
ctaaagtacgataagagcgtactggctaatgcaggctatgagctcaatggcattaagttt
gatactatgcttgagtcgtacgtatttaatagcgtgggcactcgccatgacatggattca
ttagcacttaagtacttaggccataaaaacattagctttgaagatattgccggcaaaggg
aaaaagcagcttacctttaatcaaattgagcttgagcaagctgcgccttatgccgcagaa
gatgccgatattacactgcgtttacaccaagtactttggccaaaattagaagctgatgag
aaattaaagtcagtatttgaaaccatagaaatgccattagtgaatgttatttctgatatt
gaacgtaccggcgtagcaattgatagcaacatgctggcggcgcacagccagcgtttaggc
gagcgcttacttgaacttgaaaaagaagcgtttgagatagcgggcgaaccatttaaccta
agttcgccaaaacagctgcaagtacttttatttgaaaaacttgagctgccagtcattaaa
aaaacacctaaaggtgcgccttcaacggctgaagaagtattacaagaacttgcccatgac
tatccattgcctaaggtgattattgagcaccgtggcttgtctaagcttaaatcaacctat
accgataaattaccattgatggttaatgagaaaacacagcgcgtgcatacttcttatcat
caggctgttacggctacaggtcgtttgagttctaccgatcctaatttacaaaatattcct
attcgctcagaagaagggcgccgtatacgtgaggcatttgtagcggcaccaggttataaa
attgtggcggccgattatagccaaattgagttgcgtattatggcgcacttatcgcaagac
aaaggactactaaatgcctttgcaaacggtttagatgttcacagtgccaccgctgctgaa
gtatttggtgttgagcttgatgaggtaaccacagatatgcgccgtaaagcgaaagcagta
aactttggtttaatttatgggatgtcagcctttggtttagcgcgtcaacttgatgtgcca
cgccacgaagcgcagcactacatagataaatactttgagcgtttccctggggtacttgag
tacatggaaacaacgcgtgagaaagcggctgaaaacgggtacgtagaaactatttttggc
cgtcgtttacacttaccagaaattaatgcacgtaatggagctcgtcgtaaaggcgccgaa
cgtgcagcaatcaatgcaccaatgcaaggcacagctgctgatattattaaaaaagcaatg
ctgagcgtgcatagctgggttaatgagcaagcccctaataccattaaattacttatgcaa
gtacacgatgagttggtttttgagattaaaactgattgtgctcaagcatatacaaagcaa
atttgtgagttaatgtcgcaagcggctagcttagatgtccctttgattgtagaagctgac
gaaggtgaaaactgggaacaagcccattaa
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