Pseudoalteromonas sp. MM1: PspMM1_03160
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Entry
PspMM1_03160 CDS
T09926
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PspMM1_03160 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_03160 (priA)
Enzymes [BR:
psmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PspMM1_03160 (priA)
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PspMM1_03160 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
SAM_SMF
TrwB_AAD_bind
Zn_ribbon_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BED87848
LinkDB
All DBs
Position
1:complement(363868..366054)
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AA seq
728 aa
AA seq
DB search
MRFVEVAIKVPLPRTFDYKIDEQLTSLSAPIMPGMRVLVPFGNQKKVAVVLALKTHTDVP
ENKIKAVAEVIDQTPILSAQHLELLSFTARYYCYPLGETIHIALPGALRQGENPDKTSIN
MVSLTEKGAKVPSLKAKTQLNLLKQLAQSGKSSVTELKALGFSKKTIDALIDKELITQSI
EHDNQWQSIMPTVGTKPVLNKEQAVACTTINQSVGFKSFLLEGVTGSGKTEVYLQCLEEV
LKRGEQALVLVPEIGLTPQTVNRFRRRFPDTPIMLWHSALTDNERLQTWRFCEKGSCAIV
IGTRSSIFLPFLKLGMIVVDEEHDSSFKQQDTLRYHARDLAAYRAFQHKIPLILGSATPA
LETLHKAINNKYQLLSLTERAQTATDNQFMLLDMKGQPDQAGIAHASLATMRQHLNRGKQ
VMVFLNRRGFSPTLICHECGWLSECNRCSTSATFHKAIGQMICHHCGEQHRVPHQCPDCG
STQIFPNGKGTEQIEEFLSSEFPETPVTRIDRDSTRRKGSLEKALEEINQGGARILVGTQ
MLAKGHHFADVSLVLILDVDSGLYSCDFRATEHLAQLVTQVAGRAGRSGEPGQVLLQTHF
PEHPLLQDLVNNGYQDFARFALSERDDADLPPITNMAIVRAQGHSIKLVVDFLTDLVPVN
GVSGIQLLGPIPAPLERVAGMYRFQLHIQAQDRKVLHQYLAQMVDYLSTSKLAQKVRWSL
DVDPIDMI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgttgaagttgctattaaagttccgttaccacgcacctttgattataaaata
gatgaacaacttacctcgctctcggcgcctattatgcctgggatgcgtgttttagtgcct
tttgggaatcaaaagaaagtagcagttgttcttgcacttaaaacgcataccgacgtaccc
gaaaacaaaattaaagcggttgctgaggttattgatcaaacccctattttatctgcgcag
catttagaactgcttagctttaccgcccgctattattgctacccactcggcgaaactata
cacattgcgttgcctggtgcgcttcgtcaaggcgaaaaccccgataaaaccagtattaac
atggttagccttaccgaaaaaggcgcgaaggttccgtcgttaaaagcaaaaacccaacta
aacttattaaagcaactcgcacaatcggggaagtcgtcggtaaccgagctaaaagcgctc
ggctttagtaaaaaaacaatagatgccttaatagataaagaactcataacccagagcatt
gagcatgataatcaatggcaaagcattatgcccacagttggcaccaagccagtacttaat
aaagagcaagccgtagcatgcacaactataaatcaaagtgttggctttaagagcttttta
ttagaaggtgtgacaggcagcggtaaaaccgaagtgtatttacaatgcctagaagaggtc
cttaaacgtggcgagcaagccttagtactggtgcctgaaataggcttaacgccccaaacc
gtcaaccgatttcgtcgtcgttttcctgatacgccaattatgttatggcactcagcccta
accgataacgagcgcttgcaaacatggcgtttttgcgaaaaaggcagctgcgcaattgta
ataggtacccgttcgagcatttttctcccttttttaaagttaggaatgatagtggttgat
gaagagcatgactcatcatttaaacagcaagataccttacgttaccatgcacgcgattta
gcagcttatcgggcatttcagcacaaaataccgcttattttaggcagtgccaccccagca
ctggaaacactgcacaaagctataaacaacaaataccaacttttaagccttacagagcgc
gcgcaaactgcaaccgataatcagtttatgttgctcgatatgaaaggtcagcccgaccaa
gcgggtattgctcatgcaagtcttgccactatgcgccaacatttaaaccgtggtaagcaa
gttatggtgtttttaaatcgtcgtggtttttctcctacgcttatttgtcacgaatgtggc
tggctcagtgagtgtaatcgctgcagcaccagtgcaacttttcataaagccataggccaa
atgatttgccaccactgtggggaacaacaccgagttcctcaccagtgccctgattgcggt
agcacacaaatttttcctaacggaaaaggcacagagcaaattgaagagtttttgtcgagt
gaatttcccgaaacaccagtcacacgtatcgaccgtgattcaacccgccgtaaagggagc
ttagaaaaagcccttgaggagataaaccaaggtggggcgcgtatcctagtaggtacacaa
atgttggccaaaggtcatcattttgccgatgttagcttagtgcttatattagatgtagat
agcggtttgtactcgtgtgattttagagctactgagcatttagcccagctagtgacccaa
gttgctggccgcgcgggtcgctcgggggagcctgggcaagtattactgcaaacccacttt
cctgaacaccctttattgcaagacttagtgaataatggctaccaagattttgcccgtttt
gctttaagtgaacgagatgatgccgaccttccacccattaccaatatggctatagttaga
gcacaaggacatagtattaagctcgttgtcgattttttgacggatttggttcctgttaac
ggtgtatctggtatacaattgctcggtccaattcctgctccactagaaagagtggcaggt
atgtaccggtttcaattgcatattcaagcgcaagaccgcaaagtattgcatcagtatctt
gcgcaaatggtcgactatttaagcaccagcaaacttgcccaaaaagtgcgctggagcctt
gatgttgaccctatagacatgatttag
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