Pseudoalteromonas sp. MM1: PspMM1_03670
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Entry
PspMM1_03670 CDS
T09926
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psmm03019
]
PspMM1_03670
03009 Ribosome biogenesis [BR:
psmm03009
]
PspMM1_03670
Messenger RNA biogenesis [BR:
psmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PspMM1_03670
Ribosome biogenesis [BR:
psmm03009
]
Prokaryotic type
rRNA processing factors
PspMM1_03670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF7351
Motif
Other DBs
NCBI-ProteinID:
BED87899
LinkDB
All DBs
Position
1:422606..424078
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AA seq
490 aa
AA seq
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MSTELLINVTPSESRVALIENGVLQEIQLERIGNLGIVGNIYLGKISRVLPGMQAAFVDI
GLEKAAFLHASDIVNSASIVEGVDDEPIKKVQDIRELVRQGQYIMVQVVKDPLGTKGARL
TTDITIPSRYLVFMPDATHVGVSQRIETEEERARLKKIVAEYGDENGSFIVRTAAEGASE
AELRHDAEFLRKLWQKIVSRRKKTNKASILHEDLTLAFRTLRDYVGEDMERIRVDSKLTY
QELKLFTEEFVPLLSQALEYYPGERPIFDLFDVETEIQKALHRKVTLKSGGYLIIDQTEA
MTTVDVNTGAFVGHRNLEETIFNTNVEATSAIARQLRLRNLGGIIIIDFIDMISEDHKRR
VLHSLESALSKDRAKANINGLSALGLVEMTRKRTRESLEHILCDVCPACSGRGSQKTVET
VCYEILREIVRVNRAYDADKFMVYAAPAVSEALLNDEYHNLAELELFIGKQVNIQTESLY
SQEQFDVVMM
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaattactaataaatgtcacgccaagtgaaagccgtgttgccctaatcgaa
aacggtgtattacaagaaattcaactagagcgaattggtaacttaggtattgtcggtaat
atttacttaggaaagataagccgtgtactaccaggcatgcaagctgcttttgttgatata
ggcctagaaaaagccgcttttttacatgcctcagacatagtcaatagcgcctcaatagtt
gagggtgtagacgacgagccaatcaaaaaagtacaagatatacgtgaactagtacgccaa
ggccaatacattatggtgcaagtggttaaagatccgctgggcactaaaggtgccaggctt
accaccgatatcactattccttcgcgctatttagtgtttatgccagatgctactcatgta
ggtgttagtcagcgtatagaaaccgaagaagagcgtgcgcggcttaaaaaaatagtggcg
gaatacggcgacgaaaacggtagttttattgtccgtacagcggcagaaggtgccagtgaa
gcggagctaagacacgatgctgaatttttacgaaagctatggcaaaaaattgtatcacgt
cgtaaaaaaaccaataaagccagtatattacatgaagatttaacgcttgcatttagaact
ctgcgtgactacgtaggtgaagatatggagcgtattagggttgactctaagctaacctat
caagaactaaaactgtttactgaagagtttgtacctttgctttcgcaagcacttgagtac
tatcctggcgagcgtcctatttttgatttatttgacgttgaaaccgaaattcaaaaagcg
ctacatcgtaaagtcacacttaagtcaggcggttatttgatcatagatcaaaccgaagcg
atgaccacagttgatgtgaataccggcgcgtttgtagggcatcgtaatttagaagaaacc
atttttaataccaatgtggaagccacatcagccattgctaggcagctacgtctgcgtaac
ttaggtggtattattattatcgattttatcgatatgatcagcgaagatcataaacgcaga
gtattacattcattagaatcggcgttatctaaagaccgtgcaaaagccaacataaacggc
ttaagcgcattaggcttagtagaaatgacccgaaagcgcacccgcgaaagcctagagcat
attttatgtgatgtgtgtcctgcttgctctgggcgtggctcacaaaaaacagttgaaacc
gtatgctacgaaatactgcgcgaaatagtgcgtgttaaccgtgcttacgatgctgataaa
tttatggtttatgcagcgcctgcggtaagtgaagccttactcaacgatgagtaccataac
ctagccgaacttgaactattcattggtaaacaggtcaatatccaaacagagagcctatat
agccaagagcagtttgatgtggtaatgatgtaa
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