Pseudoalteromonas sp. MM1: PspMM1_05970
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Entry
PspMM1_05970 CDS
T09926
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PspMM1_05970 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_05970 (ung)
Enzymes [BR:
psmm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PspMM1_05970 (ung)
DNA repair and recombination proteins [BR:
psmm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PspMM1_05970 (ung)
Prokaryotic type
PspMM1_05970 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
BESS
Motif
Other DBs
NCBI-ProteinID:
BED88129
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All DBs
Position
1:687997..688659
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AA seq
220 aa
AA seq
DB search
MSDWSAFLEYELQQPYMQQTLDYVAKRREEGVAIYPPESQVFSAFEATALNNIRVVILGQ
DPYHGEGQAHGLCFSVLPEVKKLPPSLKNMYKELATDIPGFDIPEHGYLQNWAEQGVFLL
NTVLTVEQGQAHSHKHLGWEQFTDSVIAHINAHCKGVVFILWGAHAQKKGKNINSARHHI
LKGPHPSPLSAHRGFFGCKHFSQTNELLQAQGDKPINWQV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattggtcagcctttttagaatatgaattacagcagccttatatgcagcaaacg
ttagattatgtcgcaaagcgccgcgaagaaggggttgctatttacccgccagagtcacaa
gtatttagcgcctttgaagctacagcccttaacaatattcgcgtggttattttaggccaa
gacccataccacggagaaggccaagcccatggtttatgtttttctgtgttgccagaggtt
aaaaagttaccgccgtcgctaaaaaatatgtacaaggaattggcaacggatattcccggt
tttgacataccagagcatggttacttacaaaactgggctgagcagggcgtgtttttactc
aataccgtactcacggttgagcaaggccaagcccactcacataagcatttagggtgggag
caatttaccgatagcgtgatagctcatataaatgcacactgcaaaggggtcgtgtttatt
ttatggggcgctcatgcacaaaaaaaaggtaaaaatattaacagcgctcgccatcatatt
ttaaaagggccgcacccatcaccgctttctgcgcatcgtggtttttttggttgtaagcac
ttttcacaaacaaatgaattattacaagcccaaggcgataagcccattaattggcaggtt
taa
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