Pseudoalteromonas sp. MM1: PspMM1_07520
Help
Entry
PspMM1_07520 CDS
T09926
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm00260
Glycine, serine and threonine metabolism
psmm00460
Cyanoamino acid metabolism
psmm00630
Glyoxylate and dicarboxylate metabolism
psmm00670
One carbon pool by folate
psmm00680
Methane metabolism
psmm01100
Metabolic pathways
psmm01110
Biosynthesis of secondary metabolites
psmm01120
Microbial metabolism in diverse environments
psmm01200
Carbon metabolism
psmm01230
Biosynthesis of amino acids
psmm01240
Biosynthesis of cofactors
psmm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PspMM1_07520 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PspMM1_07520 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PspMM1_07520 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PspMM1_07520 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PspMM1_07520 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PspMM1_07520 (glyA)
Enzymes [BR:
psmm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PspMM1_07520 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
OKR_DC_1
Beta_elim_lyase
DegT_DnrJ_EryC1
Chlorosome_CsmC
SapB_1
Motif
Other DBs
NCBI-ProteinID:
BED88284
LinkDB
All DBs
Position
1:855048..856304
Genome browser
AA seq
418 aa
AA seq
DB search
MLERSMNISDFDPELFDAINKETARQEEHIELIASENYCSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRANELFGSDYANVQPHAGSQANAAVFLALLEAGDTVLGMS
LAHGGHLTHGSHVSFSGKLYNAIQYGLDEVTGEIDYAQVEALALEHKPKMIIGGFSAYSG
IVDWAKFREIADKVGAYLFVDMAHVAGLIAAGVYPSPVPHAHVVTTTTHKTLAGPRGGLI
ISACGDEAIYKKLNSAVFPGGQGGPLCHIIAAKAVAFKEALQPEFKTYQAQVVKNAQAMV
AVMQERGYKIVSDKTENHLFLLDLIDKDITGKDADAALGNANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFKEAESKELAGWICDVLDNINDESVQAQVKEKVKAICAKLPVYA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacgtagcatgaatatttcggattttgatccagagttatttgacgcgataaac
aaagaaacagctcgccaagaagagcacattgaattaatcgcatcagaaaactactgtagc
ccacgcgtactagaagcacagggttcacagcttacaaacaaatacgctgaaggttacccg
ggcaaacgttactatggcgggtgtgagcatgttgacgtagttgaacaacttgcaattgat
cgtgctaacgagctatttggttctgactatgcaaacgttcagccacatgcgggttctcaa
gctaatgcagctgtttttttagcattattagaagcgggtgacactgtacttggtatgagc
ttagctcatggtggacacttaacgcatggttcacacgtaagcttctctggtaagctatat
aatgctatccaatacggactagacgaagtaaccggcgaaattgattacgcacaagttgaa
gcgctagcactagagcataaaccaaaaatgattattggtggtttttctgcatattcaggt
attgttgattgggctaaattccgtgaaattgctgataaagtaggtgcttacttatttgtt
gatatggctcacgttgctggtttaattgcggcgggtgtttacccaagcccagtacctcac
gcgcatgttgtaaccacaacaacacacaaaacgttagcaggccctcgtggtggtttaatt
atttctgcatgtggcgacgaagcaatttacaaaaagcttaacagcgctgtgttcccaggt
ggccaaggtggtcctttatgtcacattattgctgcaaaagccgtggcatttaaagaagca
ctacaaccagaatttaaaacgtaccaagcacaggtagttaaaaatgcccaagctatggtt
gctgttatgcaagagcgcggttacaaaatcgtatctgataaaacagaaaaccacttattc
ttacttgatttaatcgataaagatatcacaggtaaagatgcagatgcagcgcttggtaat
gcaaatattaccgtgaacaaaaactcagtaccaaacgatcctcgttcaccgtttgttact
tcaggtttgcgtattggttcacctgcaattacgcgtcgtggctttaaagaagctgaatcg
aaagagcttgcaggctggatttgtgacgtattagacaacatcaacgatgagtctgtacaa
gcgcaagttaaagaaaaagttaaagcaatttgtgcaaaattacctgtatacgcttaa
DBGET
integrated database retrieval system