Pseudoalteromonas sp. MM1: PspMM1_07650
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Entry
PspMM1_07650 CDS
T09926
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PspMM1_07650 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_07650 (xseB)
Enzymes [BR:
psmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PspMM1_07650 (xseB)
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PspMM1_07650 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
BED88297
LinkDB
All DBs
Position
1:complement(870990..871232)
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AA seq
80 aa
AA seq
DB search
MATKKPENLSFEQALEELSSIVGEMEQGDLSLEQSLKQFERGIALANASTGKLQQAEQKV
SILMGNDEKAALTSFYNDME
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaaaaaacctgaaaacctaagttttgaacaagcactcgaagaactctcaagc
attgttggtgaaatggaacaaggtgacttatcgcttgaacagtcgttaaagcaatttgag
cgtggtatagccttagctaacgcctcaacaggtaagttacaacaagcagaacaaaaagtg
tctattttgatgggtaatgacgaaaaagcagcgcttacttccttttacaacgatatggaa
taa
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