KEGG   Pseudoalteromonas sp. MM1: PspMM1_08430
Entry
PspMM1_08430      CDS       T09926                                 
Name
(GenBank) hypothetical protein
  KO
K02450  general secretion pathway protein A
Organism
psmm  Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:psmm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psmm02044]
    PspMM1_08430
Secretion system [BR:psmm02044]
 Type II secretion system
  General secretion pathway protein
   PspMM1_08430
SSDB
Motif
Pfam: AAA_22 AAA_16 AAA_5 AAA_19 AAA_30 SLFN-g3_helicase AAA_14 AAA AAA_7 Sigma54_activ_2 TsaE TniB PIF1 cobW nSTAND3 DUF5906 TrwB_AAD_bind NPHP3_N AAA_11 T2SSE Sigma54_activat AAA_25 AAA_18 NTPase_1 ATPase_2 Mg_chelatase DUF815 AAA_33 Viral_helicase1 G-alpha ABC_tran RsgA_GTPase AAA_29 GvpD_P-loop Helicase_RecD Bac_DNA_binding NACHT
Other DBs
NCBI-ProteinID: BED88375
LinkDB
Position
1:956731..957648
AA seq 305 aa
MYLSYFGLSEKPFSISPNPHYLFLSERHKEALAHLTYGLGEDGGFVLLTGEVGTGKTTIT
RSMLEQLPQNTQVAMIHNPALSELELLASICDELNITYDATNATLKSLTDIIKQHLEANN
KAGGHTILIIDEAQLLAPDVLEQLRLLTNIETDHKKLLQIVLVGQPELQALLKRTELRQL
AQRITARYHLLPLTQGQTVAYIKHRLHIAGCDKGVFSLDAMQAVHQLTGGIPRLMNLVCE
RALVGAFSKQQLIVDSDIIKQSAQESLPMDFVATQTNAPKSTGRIYYYLAFAALFAVGVG
MSFII
NT seq 918 nt   +upstreamnt  +downstreamnt
gtgtatttaagctactttggcttgagcgaaaagccattttcgatctcgcccaacccccat
tatttatttttaagcgaacgccataaagaggcacttgcccacttaacctatggtttaggc
gaagatggcgggtttgtattgctcactggcgaagtgggaacaggcaaaaccacgattacc
cgtagcatgttagagcaattgccacaaaacacacaagttgcgatgatccataacccagct
ttgtcggaacttgagcttttggccagtatttgcgatgagctaaatattacttacgatgcc
acaaacgccacccttaaaagtttaaccgacataattaagcagcacctagaggctaataat
aaagcgggcgggcacactattttaattattgatgaagcgcagctccttgcccccgatgtg
cttgagcaattgcgactgctaaccaacatagaaactgatcataaaaagctattacaaatt
gtattagtgggtcaaccagagcttcaggcattattaaaacgtactgagcttaggcagtta
gcacagcgaattacagcacggtatcatttattaccgctcacccaagggcaaacggttgcg
tatataaagcatcgtttacatattgcggggtgtgataaaggcgtgttttcgctcgatgct
atgcaagctgtgcatcagttaactggcggcattccacgtttaatgaatttagtgtgtgag
cgcgcgttagttggggctttttctaagcagcagcttattgtagatagtgatattataaaa
caatctgcgcaagaatccttgcccatggactttgtggctacgcagactaatgcgcctaaa
tccacaggccgtatttattattacttagcatttgctgctttatttgcagtgggtgtgggt
atgtcgtttattatatag

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