Pseudoalteromonas sp. MM1: PspMM1_09860
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Entry
PspMM1_09860 CDS
T09926
Symbol
rlmE
Name
(GenBank) ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psmm03009
]
PspMM1_09860 (rlmE)
Enzymes [BR:
psmm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
PspMM1_09860 (rlmE)
Ribosome biogenesis [BR:
psmm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PspMM1_09860 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltr_RsmB-F
Methyltransf_25
Methyltransf_23
Methyltransf_11
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
BED88518
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All DBs
Position
1:1110118..1110747
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AA seq
209 aa
AA seq
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MTNKKHSASSKRWLKEHFDDQYVQQAQKKGWRSRAVFKLDEIQNKDKLLRPGMTVVDLGA
APGSWSQYLAEKVSDKGQVVACDILPMDSLAGVDFLQGDFREEAVLDALLKRIDGKNVDV
VLSDMAPNMSGNNSVDQAGSMYLVELALDMCHQVLKKNGAFVVKVFQGEGFDQYLQDVRN
SFKAVKIRKPDASRARSREVYIVATGYKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaaaaacattcagccagttcaaagcgatggctgaaagaacattttgatgat
caatatgttcagcaagcgcaaaaaaaaggctggcgttctcgagctgttttcaaattagat
gagatccaaaataaagataaactgcttcgccctggtatgactgttgttgatttaggtgct
gcaccaggcagctggtcacaatacctagccgaaaaagtatctgacaaaggtcaggttgta
gcgtgtgacatattaccaatggactcacttgcgggggttgactttttacaaggcgatttt
cgtgaagaagccgtgcttgatgcattgttaaaacgcattgatggtaaaaatgttgatgtg
gtactctctgacatggcaccaaatatgagcggtaataactcggtagatcaagcgggtagc
atgtatttggtagaattagcacttgatatgtgtcatcaagtattaaagaaaaatggtgca
tttgttgttaaagtgtttcaaggtgaaggctttgatcaatacttgcaagatgttcgtaat
agttttaaagcagtgaaaatacgcaaacctgatgcctcacgtgcccgttctcgggaagta
tatatagtagcgaccggctacaaactgtag
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