Pseudoalteromonas sp. MM1: PspMM1_12400
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Entry
PspMM1_12400 CDS
T09926
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psmm03000
]
PspMM1_12400
Transcription factors [BR:
psmm03000
]
Prokaryotic type
Helix-turn-helix
Other families
PspMM1_12400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
AAA_5
PAS_4
Mg_chelatase
AAA
HTH_8
MCM
AAA_3
AAA_16
PAS_3
AAA_2
TIP49
PAS_7
AAA_7
PAS_8
AAA_19
AAA_22
bpMoxR
nSTAND3
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
BED88772
LinkDB
All DBs
Position
1:1397108..1398526
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AA seq
472 aa
AA seq
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MIKQFLNDPKLLLNAVGEGIYGFDLSGNAVFVNPAAERMTGWKADELLGKKIHQYHHHSH
ADGSPYPADECQIYCTMFDGKRREVKNEVFWRKDGTSFAVEYTSTPVYRQGELIGAVAVF
RDISAQQQTQNELKQALEQVKHLSEQLQDENNYLIAELNEDWQDSGLVGQSHVFQAMLAQ
IKLVSETDSTVLILGENGTGKELVARNLHRLSKRSNQAFIKVNCAAFTPSLLESELFGHE
RGAFTGANERRKGRFELADKGTLFLDEVAELPLEAQSKLLRVLQEQEFERVGGSTTLKVN
IRVLAATNRDLWQMVQKGTFRIDLYYRLNVFPIKVPALKERKEDIPYLCTNLITQLNKRL
AKQIKGVSKKAISQLQAYDWPGNIRELQNVLEREAILTKHTVLKLSQPLHGDESTAVNTS
LTLAEAQKQHIIAVLELSQWQISGDKGAACKLGLPESTLRSKMRKLGISKNT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacagtttttaaatgaccccaaacttttacttaatgcggtaggagagggtatt
tacggctttgatttatcgggcaatgcggtgtttgtaaacccagcagctgaacgcatgacc
ggctggaaagccgatgagttattgggtaaaaaaatacatcagtatcatcatcacagtcac
gccgatggctctccttatccagccgatgaatgccaaatatattgcaccatgtttgatggt
aaacgccgcgaggttaaaaacgaagtattctggcgtaaagacggcacctcgtttgcagta
gaatacacatcaacccccgtttacaggcaaggtgagttaattggtgcagtcgcggtattt
cgcgatatatcggcgcagcagcaaacccaaaacgagcttaagcaagcgcttgagcaagtt
aagcatttgagtgagcagctgcaagatgaaaataactacctaattgcagagcttaacgaa
gactggcaagactcaggcttagttggccaaagccatgtttttcaagctatgttggcgcaa
attaaacttgttagcgaaaccgacagcacagtattaattttaggtgaaaatggaacgggc
aaagagctggtggcgcgtaacttacatagattaagtaaacgcagtaatcaagcttttata
aaagtgaactgtgcagcgtttacgccaagcttgttggagtctgaattatttggccacgag
cgtggtgcgtttaccggcgcaaacgagcggcgtaaaggtcgttttgaactggccgacaaa
ggcacgctgtttttagacgaagttgctgagctgccattagaagcgcaaagtaaattgcta
cgggtattacaagagcaagagtttgaacgggttggcggcagtacaacgcttaaggtaaat
attagggtattggcagcaaccaatcgcgatttatggcaaatggtgcaaaaaggcaccttt
cgaattgatttatattaccgccttaatgtgtttcctattaaagtgccagcgcttaaagag
cgcaaagaagacattccttatttatgcaccaatttaattactcaactaaataaacgctta
gcaaagcaaataaaaggggtgagtaaaaaagcgattagccaactacaagcttatgattgg
cctggtaatattcgcgagttacaaaacgtattagagcgcgaagctattttaactaaacat
acagtccttaaactgagccagccattgcatggcgatgaaagcacagctgtaaatacatca
cttacgcttgcagaggcgcaaaaacagcacattattgcggtgcttgaattatcacagtgg
caaatatcgggcgataaaggcgccgcttgtaaattaggcctgcccgagagcactttgcgc
tcaaaaatgcgcaaactaggaataagcaaaaatacgtga
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