Pseudoalteromonas sp. MM1: PspMM1_12900
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Entry
PspMM1_12900 CDS
T09926
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PspMM1_12900 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_12900 (recC)
Enzymes [BR:
psmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PspMM1_12900 (recC)
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PspMM1_12900 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BED88822
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All DBs
Position
1:1449837..1453139
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AA seq
1100 aa
AA seq
DB search
MLNIIQSNRMEALQAQFNQLLKVNPLQSPFDKEVVLVQSPGMSQWLKIGLSENLGIAAQV
DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILSSCINEPLYLPLKTYLEGDLD
GQKTFALCEKIADVYDQYLMYRPHWIATWDSGKDELDDVDVSIAPWQSDLWRKLVAHSKA
LGQSQFHRANMQGQLLAALENMDNSLLPKRISLFGISAIASSQLEVFEALSKKTEVFLFF
FNPSEHYWGDVVDEKTAAKIKAKYAKMPLLEAQQKKQTNPDEEYYFIGNPLLSSWGKLGR
DYFEQLVQLDARWIDGFIDAFDDSLLGQIQSEIYQLAFKGESLTDNKEWFINNEGKLPIS
DTDTSITLSDCHTPLREVERLHDYLLTLFNQNPSLTPKDIIVMMPDVGTYSPYIEAVFGG
AQNTSRFIPYALADLAIEQEKPVLSSFASLANLPFSRFGVSDILDLLQVTQIAEKFGLEA
HEYEQIQYWLERVGVKWGINAEHKSSFDLPAIDLNTWQHGLNRLLLGIAQRDEQCPFNGI
YSADEVEGMALDTLNKLVHFIDVLQRFKDELTPDDTLSNKADILSELINAIYYNEGDDSW
DLLVLQTVLEELKKHHDNGDYDKAVSQRVVSYLIKQGIQEKGVGQRFLVGQVNFCTLMPM
RAVPFKVVCMLGLNDADYPRTVQPIGFDLVPYSKKQKGDRSRKLDDRYLFLEALLSARDN
LYISYIGRSCFDNQPRMPSTLVSELLEYIGRSFVLTKDSEKTLPECLINQQHLQPFNRAY
YTADTEADTKLSNHSFNPIWLPSERIDAQPLTAIDVTAPAQLELDVFIRSVCNAQESFYQ
QTLGLRLPEFSEVAKDEEPFSLDALRRYFYLDEILEANINEQPLSTEQILQRGELPQANV
GNLVYESMAHRVDALAGQVKEHIKSGKTDPLEVSLRIENTTIEGWLNHIYLQKQVFYRSA
SIKAKDLIKGFIYHLVAQSMDQNVETLLLGLDKQISFAPLSKNEADALLSDWFELYKALR
KEPVAFYPVSGYEYVKSGGDIGKAISKFNPQYIGRGEGENPYIRLTVQSLNDCQEEFIKW
SEKLLSPLHAHAKESDHASA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatattattcaatcaaaccgtatggaagcgctgcaggctcaatttaatcagctg
ttaaaagtaaacccgctgcaaagcccattcgataaagaagtggtattagtgcaatcgccg
ggtatgtcgcagtggctaaaaattggcttaagcgaaaacctaggcatagccgcgcaggtt
gattttccgctgccatcgagctttatatggcagttgtatcagcagttattgcccaatgtg
cctaaagagtcggcatttaataagccaaaccttgcttggaaattatttgcaatactgtcc
agctgtataaatgagccgctttatttgccgttaaaaacctatttagaaggcgacctagac
gggcaaaaaacctttgcgttgtgcgaaaaaattgccgatgtgtacgaccaatacctaatg
taccgcccgcattggattgccacctgggatagcggcaaagatgaacttgacgatgttgat
gtaagcattgccccgtggcaaagcgatttatggcgaaagctggtggcgcacagtaaagca
cttggtcaaagccaatttcatcgtgccaacatgcaagggcagttacttgcagcccttgag
aatatggataatagcttactacctaagcgcattagtttatttggcatatcggccattgcc
agctcacaacttgaggtgtttgaagcgctgagcaaaaaaacagaggtatttttgttcttt
tttaacccaagtgagcactattggggtgatgtggttgatgaaaaaacagcagccaaaatt
aaggctaaatacgccaaaatgccgcttttagaagcgcagcaaaaaaaacaaactaaccct
gacgaagaatactactttataggtaacccactgttatcgtcgtggggaaaactagggcgc
gattactttgagcaactcgtacaacttgatgcgcgctggattgatggctttatagatgcg
tttgacgatagtttactagggcaaattcaaagtgagatttaccaactggcatttaaaggc
gaatcacttaccgataataaagagtggtttataaataatgagggtaaactgcctattagc
gacaccgacaccagtattacgctaagtgattgccatacaccgcttagagaagttgagcgc
ttacacgattatttacttactttgtttaatcaaaacccatcgctcacccctaaagatatt
attgtaatgatgcccgatgtggggacgtacagcccgtatattgaagcggtatttggcggc
gcgcaaaacaccagccgctttattccttatgctttggccgatttagccatagagcaagaa
aaacctgtgcttagctcgtttgccagcttggccaatttgccgttttcgcgttttggtgta
tcggatattctcgacttactgcaagtaacacaaattgccgaaaaatttggccttgaagcg
cacgagtacgagcaaattcaatattggcttgagcgtgtaggggttaaatggggtataaat
gctgagcacaaaagtagctttgatttacccgcaatcgatttaaatacctggcagcatggt
ttaaaccgtttattgctaggcatagcccagcgcgatgagcaatgcccgtttaacggcatt
tacagtgccgatgaagtagagggcatggcgcttgatacccttaataagttagtgcatttt
attgatgtactgcagcgctttaaggatgagctaacccctgatgatacgcttagtaataaa
gcggatattttatctgagctcataaatgctatttattacaacgaaggcgacgacagttgg
gacttactggtactgcaaactgttttagaggagcttaaaaaacaccatgataatggcgat
tacgataaagctgtttcgcagcgtgttgtaagctaccttataaaacaaggcattcaagaa
aaaggcgtagggcagcgctttttagtggggcaagttaacttttgtacactaatgcctatg
cgcgccgtgccgtttaaagtggtgtgtatgcttggcctaaatgatgccgactacccacgt
acagtacagccaataggttttgacttagtgccgtattctaaaaaacaaaaaggtgaccgt
tcacgtaaattagatgaccgttacttgtttttagaagctttattgagtgcccgtgacaat
ttatacataagttacattggccgttcgtgttttgacaaccaaccgcgtatgccctcgacc
ttagtaagcgagcttttagagtacataggtcgcagctttgtgcttacaaaagacagcgaa
aaaacgttgcctgagtgtttaattaatcaacagcacttacagccttttaatcgtgcgtat
tacacagcagacactgaagccgatacaaagctgagtaaccacagttttaatcctatttgg
ctgccaagcgagcgcattgacgcgcagccactaacagccattgatgtaacagcgcctgcg
caattagaacttgatgtatttattcgcagtgtgtgcaacgcacaagagagcttttaccag
caaacattaggtttacgcctacccgaatttagcgaagtagcaaaagatgaagagcctttt
agcctagatgcgctgcgccgttatttttaccttgatgaaatacttgaggccaacattaat
gagcaacctttaagtacagagcaaatattgcaacgaggggagctgcctcaagccaatgtg
ggcaatttagtgtatgagagcatggcgcaccgagtagatgcattagccgggcaagtaaaa
gagcatattaaaagcggcaaaaccgacccccttgaggtgtctttacgcatagaaaatact
actattgagggctggcttaatcatatttaccttcaaaaacaagtgttttaccgaagtgcc
agtataaaggccaaagatttaattaaaggctttatatatcaccttgttgcacaaagtatg
gatcaaaatgtagaaaccttattactggggctcgataagcaaattagctttgcaccgttg
agtaaaaatgaggccgatgccttactcagtgattggtttgaactatacaaagcgttgcgc
aaagagccagtggcattttatccggtaagtggctatgaatatgttaaaagtggtggcgat
attggtaaagccattagcaagtttaatccacaatacatagggcgcggcgagggcgaaaat
ccgtatattcgtttaacggtacaatcgctcaatgactgccaagaagaatttattaagtgg
agcgaaaaattactctccccattacatgcacatgcaaaggagagtgaccatgcaagcgct
taa
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