Pseudoalteromonas sp. MM1: PspMM1_15130
Help
Entry
PspMM1_15130 CDS
T09926
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmm03032
]
PspMM1_15130 (gyrA)
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_15130 (gyrA)
Enzymes [BR:
psmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PspMM1_15130 (gyrA)
DNA replication proteins [BR:
psmm03032
]
Prokaryotic type
DNA Topoisomerases
PspMM1_15130 (gyrA)
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PspMM1_15130 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ApbA
Motif
Other DBs
NCBI-ProteinID:
BED89045
LinkDB
All DBs
Position
1:1712346..1715045
Genome browser
AA seq
899 aa
AA seq
DB search
MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLALIQNPDLTIHELMDYIPGPDFPTAAIINGKKGIEDAYLTGRGKV
YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG
MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFVIHRRE
VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKVALTARPWDLGNV
QAMLEKAGEDNVARPDWLASELGIRDGQYYISEQQAQAILDLRLHKLTGLEHEKILAEYQ
SLLDLIAELLHILSSPERLMEVIRDELVEIKEQYGDERRTEINAAAHDISLEDLINEEDV
VVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFSTAGRL
YWLKVYQLPLASRAARGKPIVNLLPLEDDERITAILPVREYEEDKYIFMATAFGTVKKTP
LTAYSRQRASGIIAVNLNEGDSLIGVDITDGSNEIMLFTDAGKVVRFKEAEESTVVDENG
NPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMADDQRVVSLIVPKSDGAILTVTENGYGK
RTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGTLVRTRVNEVST
VGRNTQGVILIRTIDEEQVVGLQRIEEIEVTDSDLVDIEDVETVDTVNEEATDDNPPSE
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcgccaatgaaattctgccagtcaatattgaagacgagttaaaaaactcc
taccttgattacgcaatgagcgtaattgtaggacgtgcattaccagacgtacgtgatggt
ttaaaacctgttcaccgccgcgttttgtttgcaatgaacgagcttagtaatgactggaat
aagccttacaaaaaatcggcccgtgtggtcggtgacgtaattggtaaataccacccacac
ggcgacagtgcagtttatgacaccatcgtacgtatggcacagccattctcactacgttat
atgcttgtagatggccaaggtaacttcggttcggttgatggtgattcagcagcggcaatg
cgttatacagaagttcgtatggcaaaaatgtcgcatgagttattagccgatcttgaaaaa
gaaacggttgatttcgttccaaactacgacggtaccgaacaaattcctgacgttttacca
accaaagtgcctaacttactagttaacggttcatcgggtattgcggtaggtatggcaaca
aacattccaccacataacttaactgaagtggttaatggttgtttagcgcttattcaaaat
cctgatttaacaatccatgaattaatggattacatcccaggtcctgatttcccaacggct
gccatcattaatggtaaaaagggcattgaagatgcttatttaaccggccgtggtaaagtg
tacatgcgtgcccgcgccgacatcgaaaccgatgaaaaaacaggccgcgaaaccattatc
gtgcacgaaattccttatcaagttaacaaagcacgtttaattgaaaaaattgctgagctt
gttaaagataaaaaaattgaaggcattagcgcactacgtgatgaatcagataaagacggt
atgcgtatcgttattgagatcaaacgtggtgacgtaggtgaagttattttaaataaccta
tacgcacaaactcagttacaaactgtgtttggtatgaatatggttgcattaattaataac
caacctaagtgtttcaacttaaaagaaatgcttgaagagtttgttattcaccgccgtgaa
gtggttacacgccgtaccgtatttgatttacgtaaagcgcgcgaccgtgctcataccctt
gaaggtttagcaattgcgcttgccaacatcgacccaattattgagcttattcgtaaatcg
ccaaccccagctgaggctaaagttgccttaacagctcgcccatgggatttaggtaacgta
caagcgatgcttgaaaaagcaggcgaagacaacgtagcccgcccagattggctcgcaagc
gagcttggtattcgcgatggtcagtactatatttctgagcaacaagcgcaagcaattctt
gatttacgtttacacaaactaaccggccttgagcatgaaaaaatcttagcagagtatcaa
tcgctgttagatttaattgctgaattattacatatattaagcagccctgagcgtttaatg
gaagttattcgtgatgagttagttgaaattaaagagcaatatggtgatgagcgccgcaca
gaaattaacgccgcagcgcacgacattagccttgaagatttgattaacgaagaagatgtt
gttgtgaccttgtcgcacgaaggttatgttaagtatcaggctctgtctgattacgaagcg
cagcgccgaggtggtaaaggtaagtcagcaacaaagatgaaagatgaagatttcattgag
cgtcttttagtggctaacacccacgacaccattttatgtttctcgactgcgggtcggttg
tactggcttaaagtataccagttaccactggctagtcgcgccgcacgcggtaagccaatt
gttaacttactgccacttgaagatgatgagcgtattactgctatcttacctgtacgcgag
tacgaagaagataagtacatctttatggcaactgcgtttggtaccgtgaagaaaacacca
ctaacggcatacagccgtcaacgtgcaagcggtattattgcggtaaacctcaacgaaggc
gatagcctaattggggttgatattaccgacggtagcaacgaaattatgttgtttactgat
gcaggtaaagtagtacgctttaaagaagcggaagagtctactgtagttgatgaaaacggt
aacccggtacttgacgaagaaggcaaccctgaaattcgtttcaaaggtgttcgtcctatg
ggtcgtactgctactggcgttcgtggtattaaaatggccgacgaccaacgcgtagtgtca
ttaattgtgccaaaatctgacggtgctattttaaccgtgactgaaaatggttatggtaaa
cgtactcaacttgaagattatccatctaagagccgtgcaacacaaggtgttgtatctatc
aaggtgagtgagcgtaatggcgcagtagttggtgctgtacaagttgacgacaacgatgaa
ataatgattatttcaaaccgtggtacacttgttcgtacccgtgttaatgaagtatcgaca
gttggacgtaacacccaaggtgttattttgatcagaactattgacgaagagcaagtagtt
ggtttacaacgtatcgaagagattgaagttacagatagtgacttagttgatattgaagac
gttgaaacggttgatacagtaaatgaagaagcaacggatgataatccaccttctgaataa
DBGET
integrated database retrieval system
