Pseudoalteromonas sp. MM1: PspMM1_15290
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Entry
PspMM1_15290 CDS
T09926
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03030
DNA replication
psmm03430
Mismatch repair
psmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PspMM1_15290
03430 Mismatch repair
PspMM1_15290
03440 Homologous recombination
PspMM1_15290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmm03032
]
PspMM1_15290
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_15290
Enzymes [BR:
psmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PspMM1_15290
DNA replication proteins [BR:
psmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PspMM1_15290
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PspMM1_15290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
BED89061
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All DBs
Position
1:1733108..1733812
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AA seq
234 aa
AA seq
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MVKQSHFDWQAHYKTLANNAKNEHLKAFYQHAYGETHAPLKDISFVALDFETTGLNSEVD
DIVSIGLVPFTMQRVYCTHAKHWVVQPRKSLSEESIVIHGITHSEVDDAPDLTSRLGPLL
NALSGKVVVVHYAVIERHFLNNALLARINEGIQFALVDTMELEQRALRARQGLIGRLFNQ
KIGSLRLTDCRARYSLPAYHNHNALTDALATAELLIAQIQYHYREDTPLFELLS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggttaaacaatcgcattttgattggcaggctcactataaaacactggctaacaacgct
aaaaatgagcatttaaaagcgttttaccaacacgcttatggtgaaacccacgcgccttta
aaagacatttcgtttgtggctcttgattttgagacaaccggtctaaatagtgaggtggac
gatatagttagtattggcttagtcccctttacaatgcaaagggtgtattgcacacatgct
aagcattgggtagtgcagcctcgtaaaagcttaagtgaggagtcgattgttattcatggt
attacgcattcagaagtggatgatgctcctgatttaacctctcgtctagggccgctactt
aatgcacttagtggaaaagttgtggtggtgcattatgcagtgatagagcggcacttttta
aacaatgcattacttgcgcgaattaacgaagggatccagtttgcattagtcgacaccatg
gagcttgagcaacgagcattgcgtgctcgccaaggcttaataggacgtttgtttaatcaa
aagatcggttcgcttaggttaactgattgccgcgcgcggtattcactgccggcttatcat
aaccataatgcgctaactgatgctctggcaacggctgagttgcttatagcgcaaattcag
tatcattatcgtgaagatacaccactgttcgagctacttagttaa
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