KEGG   Pseudoalteromonas sp. MM1: PspMM1_15290
Entry
PspMM1_15290      CDS       T09926                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psmm  Pseudoalteromonas sp. MM1
Pathway
psmm03030  DNA replication
psmm03430  Mismatch repair
psmm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psmm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PspMM1_15290
   03430 Mismatch repair
    PspMM1_15290
   03440 Homologous recombination
    PspMM1_15290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psmm03032]
    PspMM1_15290
   03400 DNA repair and recombination proteins [BR:psmm03400]
    PspMM1_15290
Enzymes [BR:psmm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PspMM1_15290
DNA replication proteins [BR:psmm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PspMM1_15290
DNA repair and recombination proteins [BR:psmm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PspMM1_15290
SSDB
Motif
Pfam: RNase_T CAF1
Other DBs
NCBI-ProteinID: BED89061
LinkDB
Position
1:1733108..1733812
AA seq 234 aa
MVKQSHFDWQAHYKTLANNAKNEHLKAFYQHAYGETHAPLKDISFVALDFETTGLNSEVD
DIVSIGLVPFTMQRVYCTHAKHWVVQPRKSLSEESIVIHGITHSEVDDAPDLTSRLGPLL
NALSGKVVVVHYAVIERHFLNNALLARINEGIQFALVDTMELEQRALRARQGLIGRLFNQ
KIGSLRLTDCRARYSLPAYHNHNALTDALATAELLIAQIQYHYREDTPLFELLS
NT seq 705 nt   +upstreamnt  +downstreamnt
atggttaaacaatcgcattttgattggcaggctcactataaaacactggctaacaacgct
aaaaatgagcatttaaaagcgttttaccaacacgcttatggtgaaacccacgcgccttta
aaagacatttcgtttgtggctcttgattttgagacaaccggtctaaatagtgaggtggac
gatatagttagtattggcttagtcccctttacaatgcaaagggtgtattgcacacatgct
aagcattgggtagtgcagcctcgtaaaagcttaagtgaggagtcgattgttattcatggt
attacgcattcagaagtggatgatgctcctgatttaacctctcgtctagggccgctactt
aatgcacttagtggaaaagttgtggtggtgcattatgcagtgatagagcggcacttttta
aacaatgcattacttgcgcgaattaacgaagggatccagtttgcattagtcgacaccatg
gagcttgagcaacgagcattgcgtgctcgccaaggcttaataggacgtttgtttaatcaa
aagatcggttcgcttaggttaactgattgccgcgcgcggtattcactgccggcttatcat
aaccataatgcgctaactgatgctctggcaacggctgagttgcttatagcgcaaattcag
tatcattatcgtgaagatacaccactgttcgagctacttagttaa

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