Pseudoalteromonas sp. MM1: PspMM1_20100
Help
Entry
PspMM1_20100 CDS
T09926
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03030
DNA replication
psmm03430
Mismatch repair
psmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PspMM1_20100
03430 Mismatch repair
PspMM1_20100
03440 Homologous recombination
PspMM1_20100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmm03032
]
PspMM1_20100
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_20100
Enzymes [BR:
psmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PspMM1_20100
DNA replication proteins [BR:
psmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PspMM1_20100
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PspMM1_20100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_14
AAA_5
AAA_18
AAA_assoc_2
RCF1-5-like_lid
AAA_16
AAA_7
TIP49
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
Rad17
Mg_chelatase
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BED89542
LinkDB
All DBs
Position
1:complement(2265736..2268168)
Genome browser
AA seq
810 aa
AA seq
DB search
MSYQVLARKWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAK
SLNCDEGISASPCGQCSSCTDIESGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQ
SEIKTQLEHVLTQEQLNFDKDALSIIAKAADGSMRDALSLTDQAIAQTNGDINNQAVQAM
LGLMDTHYSQSLLAALLAQDGGALMDEIAQVASRNPNYIALLDDLIALTHLVQLTQLVPQ
AAQLDDKNADYISHVAQHTQAQQIQIYYQLLLNGKKDLQWAPEPRLGFEMIMLRLLAFES
AGTTYAHSHPEPSDTPSTATPAPTSSKGRADALRDILNKNKTPSQNETSATQAMVEQSPA
QNQKIDEPAAPPTSSPNEQDNNSAPSTVQNTPNDTSSSVQQGEKMAKTDEAAERQSEDDA
YLQHSNMEQNLAAQFDDVMSSAVDQGYNPTPVEQHEPGIADDENITVREQEAQAQSAIAR
ILRDRNISGAGRLSGESVNTPEQAQTSKTPAQATPDNQAKPHDTSMQASESQNDSPPWQD
HPQGDSEKKPTLPVTGSQTPAEPVTQSQPARKVDFQQKHQTITENLAPELLEQINPQKKP
EVIEQEPAIPVPDDFQSPISEIKFAHQQDEWAYLIKRMGLGGRMRQFALHSIFTKQGDSL
HIDVDESQKHLDTPMLRQKLDAALSSIYGHNVSLSINFAKGVIDSPYLIQQKIDAGRHQQ
AIDVITADENIVQFQQLFSAEIDENSIQAL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctagctagaaaatggcgtccgcaaacctttcatgaattggttggc
cagtctcatgtaaagcaagcgcttgttaatgcgcttacacaaaatagactgcatcacgct
tatttattcactggaacccgtggtgtgggtaaaaccaccattgcacgcatttttgctaaa
agcttaaattgtgacgaaggtatatcggcatctccatgtgggcaatgtagtagttgtact
gacatcgagtcagggcgatacattgacttacttgaaattgatgccgcttctcgcaccaaa
gtcgaagatactcgtgaaattcttgataacgttcaatacgcaccaacacgcggacgttat
aaagtatacctaatagatgaagtgcacatgctttctaagcatagctttaatgcgttatta
aaaacgttagaagagccgcctgagcatgtgaaatttttactggcaaccaccgatccgcaa
aagttacctgttaccattttatcgcgctgcttacagtttaacttaaatgcactttcgcaa
agtgaaattaaaactcagcttgaacacgtacttactcaagagcaactaaactttgataaa
gatgcactaagtattattgcaaaagccgctgatggcagtatgcgagacgccttgagctta
acagatcaagctattgcgcaaaccaacggcgacataaacaatcaagccgtgcaagccatg
cttggtttaatggacacacattatagccaaagtttgcttgctgctttgttagcacaagac
ggtggtgcactcatggatgaaatagcccaagtagcgagccgtaaccctaactatattgcc
ctacttgatgatttaattgcattaactcaccttgttcaattaactcagcttgtccctcaa
gccgcgcaacttgatgataaaaatgccgattatataagccatgttgcacagcacacccag
gctcaacaaatacagatttattaccagttactattaaacggtaaaaaagacttacaatgg
gcgccagagcctcgtttaggctttgaaatgataatgctgcgattgttagcatttgaatcg
gcaggtacaacctatgctcattcacatcctgagcctagtgacacaccgagtacagcaacg
cctgcgcctaccagtagtaaaggccgtgccgatgcgctgcgcgatatattaaataagaat
aaaacaccgtcgcaaaacgaaacctctgctacacaagcaatggttgagcaaagccctgcg
caaaaccaaaaaattgatgaacccgcagcgccgccaacaagttcgccgaatgaacaagac
aacaacagcgcaccttctacggttcaaaacactccaaacgatacgtccagctctgtgcag
caaggcgagaaaatggccaaaactgatgaagctgctgagcgtcaaagtgaagacgacgct
tacctgcaacacagtaatatggagcaaaatttagcggcacaatttgatgatgttatgagc
agtgctgtagatcaaggttataaccctacacctgtagaacaacacgagccaggcatagcc
gatgatgaaaatatcactgtgcgtgaacaagaagcccaagcacaatcagcaattgcgcga
attttacgggatagaaatatatcgggtgcaggtaggctttcaggggagagtgtaaatacc
cctgagcaagcgcaaacatcaaaaacacctgctcaagctacgcctgacaaccaagcaaag
ccacacgatacaagcatgcaagcgagtgagtcacaaaacgattcaccgccatggcaagac
catccgcaaggcgatagcgaaaaaaagccaacgctcccagtaacagggagccaaacgcca
gctgagccagtaacgcaaagccagccagcgcgtaaggttgattttcaacaaaagcaccaa
acgattacagaaaacttagcccctgagttgcttgagcaaattaacccgcaaaaaaagcct
gaggtaatagagcaagagcccgctataccggttcccgatgactttcaaagcccaattagc
gagattaaatttgcgcatcagcaagatgagtgggcttatttaattaagcgcatgggactt
ggtgggcggatgcgccaatttgcattacactcgatttttaccaagcaaggcgacagttta
catattgacgtggatgaatcacaaaaacacttagatacccctatgcttaggcaaaagctc
gatgcggcgttatcaagcatatatggtcataacgtttcgctgagtattaactttgcaaaa
ggggtgattgactcgccttatttaattcagcaaaaaatagatgcaggacggcaccagcaa
gcaattgatgtgatcacagctgatgaaaacatagtacaatttcagcagctatttagcgcc
gaaattgacgaaaacagtattcaggcattgtaa
DBGET
integrated database retrieval system
