Pseudoalteromonas sp. MM1: PspMM1_20920
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Entry
PspMM1_20920 CDS
T09926
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PspMM1_20920 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_20920 (uvrB)
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PspMM1_20920 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PspMM1_20920 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
Kinesin
P-loop_SecA
UB2H
DUF87
AAA_30
AAA_5
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BED89624
LinkDB
All DBs
Position
1:complement(2352815..2354809)
Genome browser
AA seq
664 aa
AA seq
DB search
MNDHFELKSQFKPAGDQPTAIKQLEEGLEAGLAHQTLLGATGTGKTFTMANIISDLNRPT
IIMAHNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLSATKALLERRDTIIVASVSAIYGLGDPDSYMKMMLLLKVGEQVDQRDMLRRLAELQ
YTRNDIDFSRGTYRVRGEVVDIFPAESDTYAVRVEMFDDEIERLSIFDPLTGAVEKHIVR
ATIYPKTHYVTPREKILDAIEKIKAELKERRAQLLSANKLVEEQRIAQRTQYDIEMMTEL
GYCSGIENYSRYLSGRTPGDPPPTLLDYLPDDALMIIDESHVTVSQIGAMYKGDRSRKEN
LVEYGFRMPSAMDNRPLRFEEFEAIAPQTIYVSATPGDFELERSAGEVAEQVIRPTGLLD
PEIEIRPVSTQVDDLLSEIYKCVEKGERVLVTTLTKRMSEDLTDYLSEHNVKVRYLHSDI
DTVERVEIIRDLRAGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSARSLIQTIG
RAARHLDGRAILYADKVTKSMEKAIGETQRRREIQHAFNIEHGIEPQALVKKITDIMDVG
EEAAPQDNLKLVRKESKKILSAKEIATQIKQLESKMHAYASDLEFEKAASVRDEIHELQQ
QLIN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcactttgagctaaagtcacaatttaaacccgcgggcgatcagcccacagcg
attaaacagcttgaagaaggcttggaagccgggcttgcgcatcaaaccttactcggtgcc
acaggcacaggtaaaacgtttactatggccaatattatcagcgatttaaatcgccctaca
ataataatggcgcataataaaacgctagccgcgcagttgtatggagaaatgaaagagttt
tttcctaataatgcagttgagtattttgtatcttactacgattactaccagccagaagcc
tacgtggtcgccagcgatacattcatagaaaaagacgcctctattaatgagcacatagag
caaatgcgtttaagtgctactaaggctttgcttgagcgccgcgataccataatagtggcc
tctgtgtcggctatttatggattaggcgaccccgactcatacatgaaaatgatgctgctt
ttaaaagtaggcgaacaggtcgaccaacgcgatatgctgcgccgcttagctgagctgcaa
tatacccgtaacgacattgactttagccgtggtacttaccgtgtacgtggcgaagttgtt
gatatatttcctgccgagtcagatacctatgcagtacgcgtagaaatgtttgatgacgaa
atagagcgccttagtatttttgatccgcttaccggtgcggtagaaaaacacatagtacgt
gccactatttaccctaaaacgcactatgtaacgccacgcgaaaaaattcttgatgccata
gaaaaaataaaagccgagcttaaagaacgtagagcacaattattaagtgccaataaatta
gtagaagagcagcgcatagcgcagcgtacacaatacgacatagaaatgatgaccgagctt
ggttattgctcgggcatagaaaactacagccgttatttatcggggcgtacaccgggcgat
ccgccacccacattactagattatcttcctgatgatgcattgatgataatcgatgaatcg
cacgtcaccgtatcgcaaattggtgccatgtataaaggcgatagaagccgaaaagaaaac
ctagttgaatatggctttagaatgccatcggcgatggataaccgcccattacgctttgaa
gagtttgaagccatagcaccgcaaacgatttatgtatcggcaacgccgggtgattttgaa
ttagagcgcagcgcaggcgaagtagcagagcaagttatacgcccaaccggcctgttagac
ccagaaatagaaatacgccctgtaagcactcaagtagatgatttactctcagaaatttat
aaatgtgtagaaaaaggtgagcgtgtactggtaactacgcttaccaagcgcatgtctgag
gatttaaccgattacttaagcgagcacaatgttaaagtacgttacctgcactcagacata
gacacagtagagcgcgttgaaataattcgtgatttacgcgccggtgtgtttgatgtgtta
gtgggtattaacttattacgagaaggcttagacatgccagaagtggcactcgttgcaatt
ttagatgccgataaagaaggttttttacgctcagcacgttcacttattcaaaccattggt
cgtgctgcacgtcacctcgacggacgcgccattttatacgccgataaagtaactaaatcg
atggaaaaagcgattggcgaaacacagcgccgccgcgaaatacaacacgcctttaatatt
gagcacggcattgagccgcaagccttggttaaaaagatcaccgatattatggatgtgggc
gaagaagccgcaccacaagataatcttaagctggtgcgtaaagagtctaaaaaaatactc
agtgcgaaagaaattgccacacaaattaagcagcttgaaagcaaaatgcatgcttatgcc
agcgatcttgaatttgaaaaagccgcctcggtacgcgacgaaatacacgaactacaacaa
cagttgattaactaa
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