KEGG   Pseudoalteromonas sp. MM1: PspMM1_24090
Entry
PspMM1_24090      CDS       T09926                                 
Symbol
rnc
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
psmm  Pseudoalteromonas sp. MM1
Pathway
psmm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psmm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PspMM1_24090 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psmm03019]
    PspMM1_24090 (rnc)
   03009 Ribosome biogenesis [BR:psmm03009]
    PspMM1_24090 (rnc)
   03036 Chromosome and associated proteins [BR:psmm03036]
    PspMM1_24090 (rnc)
Enzymes [BR:psmm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PspMM1_24090 (rnc)
Messenger RNA biogenesis [BR:psmm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PspMM1_24090 (rnc)
Ribosome biogenesis [BR:psmm03009]
 Eukaryotic type
  90S particles
   RNase
    PspMM1_24090 (rnc)
 Prokaryotic type
  rRNA processing factors
   PspMM1_24090 (rnc)
Chromosome and associated proteins [BR:psmm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PspMM1_24090 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: BED89941
LinkDB
Position
1:complement(2741283..2741960)
AA seq 225 aa
MKKNVTELYKRIGYEFADQGLLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYDKFP
KAREGDLSRMRSTLVRGQTLAEFGLEFGLGDYLRLGPGELKSGGFRRESTLADAVEAIIG
AVFLDSNIERCGELILAWYESRLDAISPGLNQKDPKTLLQEHLQARKLSLPGYTVVDTKG
QAHNQTFTVECIVEGMESIISVGSSRRKAEQKAAEKALKILKNES
NT seq 678 nt   +upstreamnt  +downstreamnt
atgaaaaaaaatgtaacagaattatataaacgaattggctatgagtttgctgatcaaggt
ttacttgagcaggcaatgacgcaccgcagtcataaaggtcaacacaacgaacgtttagag
tttttaggcgattcaattttgagctttgtaattgctaacgccttgtacgacaaatttcca
aaagcccgtgaaggtgatttaagccgaatgcgctctacgcttgtacggggccagacactg
gctgaatttggtctcgagtttggtttaggcgattatttacgcttaggcccaggcgagctt
aaaagcggtggttttcgtcgtgaatcaacgttggctgatgccgtagaagctattattggt
gctgtgtttttagactcaaatatagagcgttgtggcgagctaattttagcgtggtacgaa
tctagacttgatgctatttcaccagggcttaatcaaaaagatcctaagaccttgctgcaa
gagcatctacaagcgcgtaagttatctttaccgggctataccgtggttgataccaaaggg
caagcgcacaatcaaacgttcacggttgaatgtatagttgaaggtatggaaagcattatt
tctgttggtagctcgcgccgtaaagccgaacaaaaagctgccgaaaaagcattgaagata
ctaaaaaatgaatcttga

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