Pseudoalteromonas sp. MM1: PspMM1_24540
Help
Entry
PspMM1_24540 CDS
T09926
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PspMM1_24540 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_24540 (mutS)
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PspMM1_24540 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BED89986
LinkDB
All DBs
Position
1:2792202..2794787
Genome browser
AA seq
861 aa
AA seq
DB search
MSFDLYAPHTIKQQTPMMQQYLKIKSEHRDILLFYRMGDFYELFFDDAKRAAQLLDISQT
HRGKAGGDPIPMAGVPYHAVENYLARLVQMGESVAICEQVGDPATSKGPVERKVVRIVTP
GTISDEALLQERQDNLLTSVWQNKKGLYGIAYLDINSGRFNVVEVNTDEAFTSTLQRLAP
AELLYCESFESTHLIEHVKGARRRPEWEFDLDTAQHLLCEQFGTKDLVGFGVDKAYAALV
AAGCLMQYVKDTQRIALPHIRAITLEHNEHAVILDAATRKNLELTVNLSGGFENTLAQVL
DKTATAMGSRLLKRRIHTPVRNKNELNSRLNAISAILNAQLYGELHDSLKEIGDIERVIA
RLALCTARPRDLTRLRSALQALAPLHALLNDANDERIASIVRHSPELPELQALLERAVID
NPPVLIRDGGVIAPGYNSELDEWRNLSKGATDILEQLELRERERTGISTLKIGYNKVHGF
FIEVSRANSHLVPADYIRRQTLKNNERYIIPELKEHEDKVLGSQSKALALEKQLYEELFE
FIAPHIEQLQMMASALADLDVLNNLAERAQTLNYAKPQLCDDDNISIKQGRHPVVEQVMK
EPFIANPVELNSQRKMLIITGPNMGGKSTYMRQTALIVLMAHIGCYVPADSAKIGNIDRI
FTRIGASDDLASGRSTFMVEMTETATILNNATAQSLVLMDEIGRGTSTYDGLSLAYATAD
HLAQKISAKTLFATHYFELTELAEQKTGLVNVHLDAIEHNDTIAFMHTVLDGAASKSFGL
QVAALAGVPKSVITQAKQKLKLLENHQSVTSPNAEQQAFSFANELPAPEPSEIEEQLSAI
DPDNLSPRQAHELLYKLKALL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatctttatgcaccgcacactataaaacaacaaacccctatgatgcagcag
tatctaaaaataaaatcagagcatcgcgatattttattgttttatcgtatgggggatttt
tatgaactcttttttgacgacgctaaacgcgcggctcaattactcgatatttcgcaaacg
catcgtggtaaagccggcggcgatcctatccctatggcaggcgtaccttatcacgcggta
gaaaactatttagcgcgtttagtgcaaatgggcgaatcggttgctatatgtgagcaagtt
ggtgaccccgctaccagtaaagggcccgttgagcgtaaagtagtacgtattgttacaccg
ggtactatttcagatgaagcactattgcaagagcgtcaagataacttactcactagcgta
tggcaaaataaaaaagggttatacggtattgcctaccttgatataaattccgggcgcttc
aacgtagttgaagttaacaccgacgaagcatttacttcaaccctacagcgcttagcgccc
gcagagcttttatactgtgaaagctttgaaagcacacatttaattgagcatgtaaaagga
gcgcgccgacgccctgaatgggagtttgacctagataccgctcaacatttactgtgcgag
cagtttggcacaaaagatttagtcggttttggtgtagataaagcttatgctgctttagtt
gctgcgggttgcttaatgcaatacgtaaaagacacacaacgtatagcgctaccgcatatc
cgtgccattacccttgagcataacgaacatgccgttatattagatgctgcaacgcgcaaa
aatttagagctaaccgttaatttatcaggtggctttgagaataccttagctcaggtactt
gataaaactgccacagccatggggtcacgtttacttaaacgccgcattcatacacctgtg
cgcaataaaaatgagcttaactcacgtttaaatgccattagcgctattttaaatgcgcag
ttatatggcgagttacacgattcattaaaagaaattggtgacatagagcgtgtaatagca
cgtcttgctttatgcaccgcacgcccgcgcgatctaactcggcttcgcagtgccctacaa
gcactcgcaccattgcatgcattattaaacgatgctaatgatgagcgtattgctagcatt
gttcgccattctccagagctgcctgagctacaggctttacttgagcgtgctgttattgat
aacccaccggtactcattcgcgatgggggcgttattgcaccaggctacaacagcgagctc
gatgaatggcgaaacttgagtaaaggcgctaccgatatacttgagcaacttgagcttaga
gagcgcgagcgcacggggatcagcacattaaaaattggctataacaaggtgcatggcttt
tttatcgaagttagtcgtgcaaattcgcacttagtacctgctgattatattcgccgccaa
acgcttaaaaataatgagcgctacataatacctgagctaaaagagcacgaagacaaagta
cttggtagccaatcaaaagcgcttgcgcttgaaaaacagttatatgaagaactatttgaa
tttatagctccgcatattgaacagcttcaaatgatggctagtgcattggccgatttagat
gtactcaataacctagcagagcgagcacaaacgctaaactatgcaaaaccacaactatgc
gatgatgataatataagcattaagcaaggtcgccacccagtggtagagcaagtaatgaaa
gaaccttttattgccaaccctgtggagctaaatagccagcgtaaaatgttgatcatcacc
ggtccaaacatgggtggtaaatcaacctacatgcgtcaaacagcacttatcgtattgatg
gcacatattggctgctatgtccctgctgatagtgcaaaaattggtaatattgaccgaata
tttactcgtattggcgctagcgacgacttagcctctggtcgctctacttttatggtagag
atgacagaaaccgccacaatattaaataatgcgactgcgcaatctttggtattaatggat
gaaataggcagaggcaccagtacctatgatggcttatcacttgcttatgcaacagctgat
catctggcacaaaaaatatctgcaaaaacattatttgctacgcactactttgaattaacg
gaacttgccgagcaaaaaaccgggctggttaatgtgcacctagatgccatagagcacaac
gacaccattgcatttatgcatacggtgcttgatggagcggcaagtaaaagctttggctta
caagtcgctgcgcttgccggcgtgcctaaatccgtaataacccaagcaaaacaaaaactt
aagctactcgaaaaccaccaaagtgtgacttcacctaatgctgagcagcaggcgttttca
tttgctaatgagctacctgcacctgaaccctctgagattgaagagcagcttagcgcaata
gacccagacaacctatcgccgcgtcaagcacacgagttactctataagttaaaagcactg
ctttaa
DBGET
integrated database retrieval system
