Pseudoalteromonas sp. MM1: PspMM1_24600
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Entry
PspMM1_24600 CDS
T09926
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psmm03016
]
PspMM1_24600 (truD)
Enzymes [BR:
psmm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PspMM1_24600 (truD)
Transfer RNA biogenesis [BR:
psmm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PspMM1_24600 (truD)
Prokaryotic type
PspMM1_24600 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BED89992
LinkDB
All DBs
Position
1:complement(2798695..2799741)
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AA seq
348 aa
AA seq
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MSDLNYLYGAPLSKADFKTTAEDFMVDEDLGIEFTGSGEHICLQVVKKGENTQYVAKLIA
QKAGVSPREVSYAGMKDRHGVCSQWFSVKVPIKKHIDFSELNSDSIFVVSQQRHERKLRT
GCHKGNRFTITLRNVTQPLDILCRINAVRAGVPNYFGEQRFGRDGHNLVMAEKMFAGERI
RDKKLRGIIISAARSHVFNQIVSLRVKEHGLAKTMHREVFMLSGSNAFFEDAISDENIAR
LASGDIMMSAPMVGKSEKGLTDQEKIWLKPYQAWCEGLGDLGLKNERRMLRLIPQNLTIE
TLDETTLKLSFGLPKGCFATALLRELVDYTDASPNERKEKDSQNEDTA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttaaattacctatacggtgcaccactttctaaagccgactttaaaaccact
gctgaagattttatggttgatgaagaccttggtatagaatttaccggcagtggtgagcat
atatgcttacaggtcgttaaaaaaggtgaaaacacgcagtacgtggccaagttaattgca
caaaaggctggagtgtcgccgcgtgaagtaagctatgccggcatgaaagaccgccacggc
gtgtgtagccaatggtttagcgtgaaagttcccattaaaaagcatattgattttagtgaa
cttaatagcgacagtatttttgtggtttcgcaacagcgccacgaacgtaaactacgtacc
ggttgccacaaaggaaatcgattcactattacgcttcgtaatgtaacccaaccccttgat
atattatgccgcattaatgccgtacgtgctggtgtacctaactactttggtgagcagcgc
tttggccgcgatgggcataatttagtgatggccgaaaaaatgtttgccggcgaacgcatt
cgcgataaaaaactacgcggtattattatctccgctgcccgttctcatgtatttaaccaa
atagtgagcttacgtgttaaagagcatgggttagctaaaaccatgcaccgtgaagtattt
atgctcagcggtagtaacgcattttttgaagatgcaataagcgatgaaaacatagcacgt
ttagcctctggcgatattatgatgtcggcccctatggtgggtaaaagtgaaaaaggctta
actgatcaagaaaaaatatggttaaaaccataccaagcatggtgtgagggcttaggcgat
ttaggccttaaaaatgagcgccgtatgctgcgcctcattccacaaaatttaaccatagaa
acactagacgaaacgactttaaaattaagctttggcttgcctaaagggtgttttgctacc
gcacttttacgagagctggtggattacaccgatgcaagccctaatgagcgaaaagaaaag
gacagtcaaaatgaagatactgcttag
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