Pseudoalteromonas sp. MM1: PspMM1_24820
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Entry
PspMM1_24820 CDS
T09926
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_24820 (radA)
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PspMM1_24820 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
AAA_22
DUF7125
Lon_C
SLFN-g3_helicase
AAA
nSTAND3
AAA_16
ABC_tran
NPHP3_N
AAA_18
AAA_14
Rad51
cobW
AAA_19
AAA_30
ATPase_2
AAA_11
NACHT
TsaE
VapE-like_dom
Thymidylate_kin
CobU
NTPase_1
DUF5906
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BED90014
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All DBs
Position
1:complement(2816493..2817878)
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AA seq
461 aa
AA seq
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MAKAAKVEFVCTECGMNYQRWQGQCRCGAWNTLAEFKPSAGQSKKAAARATVGGYAGGIG
GGSKKIDDVATTEAEKQLTEIGELDRVLSGGVTTGSVNIISGDPGAGKTTLLSDLVARMS
QRMPSLYCTAEESLSQFKNRVNRLKLNYNADELYLLSETSVETIIEELDKNKIKFAVIDS
IQAVVTDTANGSPGSPSQVKSAAQALTQYCKQNDVTMFIIAHVNKNNEIAGPQTLVHIVD
ALLHIDTNDGQVRTLRANKNRFGDIDTVGIFKMCERGMLSVDNPSEIFLSGSSTESPGST
ITCIRKGNRNLLLEIQCLTTETEAEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTFF
NIVGGLRIDETETCIDLALVTALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKE
AAQHGFTEIFIPFRNYHKSMEGLGAKITPVKTVHELLSLIN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcggcaaaagtagaatttgtttgtacagagtgtggtatgaactatcaacgt
tggcaaggtcagtgtcgctgtggtgcgtggaacacgttagcagaatttaaaccctctgca
gggcaaagtaaaaaagccgctgcgcgagcaaccgttggtggttatgctggcggcattggt
ggcggttctaaaaaaattgatgatgttgccaccactgaggccgaaaaacagcttactgaa
attggcgagttggaccgtgtattaagcggcggcgtaaccacaggctcggtaaatattatt
tcaggtgacccaggggcgggtaaaacaacgcttttatctgacttagttgccagaatgtcg
cagcgtatgccatcgctttattgtaccgctgaggagtcgctgtcgcagtttaaaaaccgt
gtaaaccgcttaaagcttaactataacgccgatgaactctatttactgtccgaaaccagc
gtagaaaccattattgaagagcttgataaaaacaaaattaagtttgcagtaatagactct
attcaagcagttgtaaccgataccgccaacggcagcccaggttcgccttcgcaagtaaaa
agtgccgcgcaagcgcttacacaatactgtaagcaaaacgatgtcactatgtttattatt
gcccatgtaaataaaaacaacgaaattgcagggccgcaaacattagtacacatcgttgat
gcgctcctgcatatagatacgaatgatggacaagtacgtacacttagagctaacaaaaac
cgttttggtgatattgataccgtgggtatttttaaaatgtgcgaaaggggcatgttgagt
gtagataaccctagtgagatttttctatcaggatcaagtactgaatcaccaggctctact
attacctgtattcgaaagggtaaccgtaacttattgctcgaaatacaatgtttaaccacc
gaaaccgaagctgaatttccgcagcgtgtgtgtgtaggtttaaacatgaaccgtataaaa
atgcttactggtattttacgtaaacacaccaaaactaagatattccacgatacgtttttt
aatattgtgggcggcttacgaattgatgaaaccgaaacctgtattgatttagcgttagtg
actgcgcttttaagcagcttaaacgaatttgttgtaccgcgtacaacctgcattatggga
gagcttagcttaaacggcgacgtgcgcccaattgacagtggtgtgccgcgagttaaagaa
gcggcgcagcatggttttaccgaaatatttattccatttcgtaattaccataaatctatg
gaagggctgggggctaaaattacgcctgtaaaaacagtgcatgagctgcttagtttgatt
aattaa
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