Pseudoalteromonas sp. MM1: PspMM1_25650
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Entry
PspMM1_25650 CDS
T09926
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm03030
DNA replication
psmm03430
Mismatch repair
psmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PspMM1_25650
03430 Mismatch repair
PspMM1_25650
03440 Homologous recombination
PspMM1_25650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmm03032
]
PspMM1_25650
03400 DNA repair and recombination proteins [BR:
psmm03400
]
PspMM1_25650
Enzymes [BR:
psmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PspMM1_25650
DNA replication proteins [BR:
psmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PspMM1_25650
DNA repair and recombination proteins [BR:
psmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PspMM1_25650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
HTH_35
Motif
Other DBs
NCBI-ProteinID:
BED90097
LinkDB
All DBs
Position
1:complement(2906566..2907189)
Genome browser
AA seq
207 aa
AA seq
DB search
MVKKLLSQYLKRRNLLSQNALTQRYLVIDLELTGLDVNQHEIVSIAWVKIDNQCIKISES
QHLINKDVKSLEQSPVFHGIVEDTVAKGQSLHSILTQLSRDFNDHILVFHNAILDWGFLK
AALKNANISAQPKLILDTLHIEKKRLTCQGAEIKQDDLTLSACRTRYELPSYHCHNALTD
AQATAELLLAQCHQINRGKEVKVGELT
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaaactacttagccaatacttaaaaaggcgaaatttattaagccaaaatgca
ctaacacagcgctatttagtgattgatttagagcttaccggccttgatgtaaaccagcat
gaaattgtctcgatagcttgggtaaaaatagataaccaatgtataaaaataagtgagtcg
cagcatttaataaataaagatgtaaaaagcctagagcaaagccctgtttttcatggcatt
gttgaagataccgttgctaaagggcaaagcttgcactctatattaacgcagctaagccgt
gattttaatgaccatattttggtttttcataacgccattctggattggggctttttaaaa
gctgcccttaaaaacgccaatataagtgcgcaaccaaagctaatactcgacaccctccac
atagaaaaaaagcgccttacttgccaaggcgcagaaataaaacaagatgatttaacccta
agtgcgtgtcgcacacgttatgagttaccaagttatcattgccataacgcactaacagac
gcacaagccaccgccgaattactactcgcacaatgccatcaaataaatcgtggtaaagag
gtcaaagtaggtgagttaacctag
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