Pseudoalteromonas sp. MM1: PspMM1_28340
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Entry
PspMM1_28340 CDS
T09926
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psmm03021
]
PspMM1_28340 (rpoH)
Transcription machinery [BR:
psmm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PspMM1_28340 (rpoH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
Motif
Other DBs
NCBI-ProteinID:
BED90366
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Position
1:complement(3225348..3226211)
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AA seq
287 aa
AA seq
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MSKDLYAMALTVGQQSASMDGYLQAVSTIPMLKAEQEKELATRLQEEGDLSAAKQLIMSH
LRFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEFV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQAEVSTVANELGVSEKEVREMESRMSG
QDMGFDLTGDDNDDAPTSTYSPVQYLTDGSADLADDIEQQQWQEQSHTRLFSALKTLDER
SQDIVSARWLSDDKATLQELAEKYSVSAERVRQLEKTAMKKLQSAMS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttatacgcaatggcacttacagttgggcaacaaagcgcaagcatggac
ggctaccttcaagcggttagcacaattcctatgcttaaagctgaacaagagaaagagcta
gcaacacgacttcaagaagaaggcgatcttagtgctgcaaagcaactcattatgtcgcat
ttacgctttgtagcacatattgctaaaagctactcggggtatggtttgccacaagccgat
ttaatccaagagggcaatataggcctgatgaaagccgttaagcgctttgacccaagtgtg
ggtgtacgcttagtatcgtttgctgttcattggattaaagcagaaattcatgagtttgtg
cttaaaaactggcgcatcgtaaaagttgcgaccactaaagcgcaacgtaaattgtttttt
aatcttcgtaaaaacaaaaaacgtttaggttggtttaaccaagcagaagtgagcactgta
gcgaatgagctaggtgtgagtgaaaaagaagttcgtgaaatggaatcgcgcatgagcggc
caagacatgggctttgacttaacgggcgacgataacgacgacgcgccaacaagtacgtat
tcaccagtacaatatttaacagatggctctgccgatttagctgacgatattgagcagcaa
caatggcaagagcagtcacatactcgtttatttagcgcacttaaaacgctagatgaacgc
tcgcaagacattgtaagtgcgcgctggttgtctgatgacaaagcaacacttcaagagctt
gcagaaaagtacagtgtatctgctgagcgtgttcgccagctagaaaaaacagcgatgaaa
aagctgcaaagtgctatgagctaa
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