Pseudoalteromonas sp. MM1: PspMM1_29410
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Entry
PspMM1_29410 CDS
T09926
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psmm03016
]
PspMM1_29410 (trmA)
Enzymes [BR:
psmm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PspMM1_29410 (trmA)
Transfer RNA biogenesis [BR:
psmm03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PspMM1_29410 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_4
Methyltransf_15
PrmA
Methyltransf_12
Methyltransf_11
DUF7812
TcdA_TcdB_pore
DREV
Motif
Other DBs
NCBI-ProteinID:
BED90473
LinkDB
All DBs
Position
1:3350080..3351177
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AA seq
365 aa
AA seq
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MAVIKIDTTQYDTQLNEKEQRITSQFKRFGVQQLEVFSSEPINYRQRAEFRVWHDGDDLF
HIMFDQATKEKIRVDTFDPAAPLVGEVMQVMIDNLKSCEVLRRKLFQIDYLSSLSGEILV
SLLYHKPLDDQWLTEIKALKEKLSSKYKIDFIGRARKQKEVLGDDFVTERLTVNGQELIY
QQVENSFTQPNAKVNIKMLEWAQDLCKPLNNDLLELYCGNGNFSIALAGSFNRVLATEIS
KSSVHSAQYNIAKNKVDNLDIIRMSSEEFTQAMNGERTFSRLEGIDLKSYDCQTILVDPP
RAGMDTLTCDLVANYENIIYISCNPNTLERDLDHLTRTHNVKRFAIFDQFPYTHHIESGV
FLQRK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgattaaaatagataccacacagtacgatacgcagctaaatgaaaaagagcag
cgtattacgtcgcaatttaagcgatttggtgtgcaacaattagaggtatttagctcagag
ccaattaactaccgccaacgtgctgaatttagagtatggcacgatggggatgatctattt
catattatgtttgatcaagcaacaaaagaaaaaattcgcgttgacacttttgaccctgct
gcgccattagttggtgaagtgatgcaggtgatgattgataatttaaagtcgtgtgaagta
ttacgtcgtaagctgtttcaaattgactatttatcgtcattaagcggtgagattttagta
agcttgctttatcacaagccacttgatgatcagtggctaactgaaattaaagcccttaaa
gaaaaactaagcagtaaatacaaaattgattttattggccgagcgcgcaagcaaaaagaa
gtgctaggcgatgactttgtcacagagcgtttaacagtaaatggccaagagcttatttac
caacaagttgaaaatagctttactcagccaaatgcgaaagtaaatattaaaatgcttgag
tgggcgcaagacctatgcaaaccacttaataacgatttactagagctttactgtggtaat
ggtaatttctctattgcattggcgggttcatttaatcgcgtattagctactgaaatatct
aagtcttctgtgcattcagcgcaatacaacattgctaaaaataaagtagataacttagat
ataattcgcatgtcgagtgaagagtttacccaggcaatgaatggtgaacgtaccttttcg
cgcttagaggggatagatttaaaaagttacgattgccaaactattttggtcgacccaccg
cgcgcaggtatggatacccttacgtgtgacttagtggctaactacgagaacattatttat
atatcgtgcaacccaaacacgcttgagcgcgatttagatcatttgacgcgcacccataac
gttaagcgttttgcgatatttgatcagttcccatatacgcatcacattgaatcgggtgtt
ttcttacaaagaaaatag
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