Pseudoalteromonas sp. MM1: PspMM1_31110
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Entry
PspMM1_31110 CDS
T09926
Name
(GenBank) hypothetical protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
psmm
Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psmm03000
]
PspMM1_31110
Transcription factors [BR:
psmm03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
PspMM1_31110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_23
HTH_40
Sigma70_r4
HTH_10
HTH_24
HTH_5
HTH_7
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
BED90643
LinkDB
All DBs
Position
1:3523986..3524642
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AA seq
218 aa
AA seq
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MSSSAFLLLDQEPINTIGINVLEPLLKTQGLDVTTGTNILDVPEGTRLLFIETSSNDAWG
KLKEQLVNLRTKCDIVLFNLDENPELANRALLSGIRGVFYTTDNADVLMKGIRLLLEDQL
WYRRDIMCNALNRMLQFNKDALHKLTEGDIEPIKLTKREKAIISLMSKGSKNKEIAEDLS
ISPHTVKTHLYSAFRKTKCRNRIELLSWAQQNIPDEIR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttcagcctttttgttattagatcaagagccaattaacaccattggcattaac
gttttagaacctttgttaaaaacgcaaggccttgacgtaaccacgggtacaaatatttta
gatgtaccagaagggactcgattactgtttattgaaacatcaagtaacgatgcatggggt
aaactaaaagagcagctagttaacctgcgcaccaagtgcgatatcgtattatttaaccta
gacgaaaaccccgagcttgctaaccgcgcgcttttgagcggtattcgtggtgtgttttat
acgacagataacgctgatgtattaatgaaaggtattcgcttacttttagaagatcagctt
tggtacagacgtgacattatgtgtaatgcgctaaatcgtatgctgcagtttaataaagac
gcactccacaagctgaccgaaggcgacatagagccaattaaacttactaaacgagaaaaa
gcaataatctcgttaatgagtaagggctctaaaaacaaagaaattgctgaagatttaagc
attagcccgcatacagttaaaacgcatttatacagcgcatttagaaaaactaaatgtcgt
aaccgtattgaactactatcttgggctcaacaaaacattccagacgaaattcgttaa
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