KEGG   Pseudoalteromonas sp. MM1: PspMM1_37340
Entry
PspMM1_37340      CDS       T09926                                 
Symbol
yoaA_2
Name
(GenBank) ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
psmm  Pseudoalteromonas sp. MM1
Brite
KEGG Orthology (KO) [BR:psmm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psmm03400]
    PspMM1_37340 (yoaA_2)
Enzymes [BR:psmm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     PspMM1_37340 (yoaA_2)
DNA repair and recombination proteins [BR:psmm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PspMM1_37340 (yoaA_2)
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII Helicase_C DEAD_2 Tc-R-P
Other DBs
NCBI-ProteinID: BED91266
LinkDB
Position
2:547786..549702
AA seq 638 aa
MTGIIKQLFSATGPLALSLDGYTPRQPQIDMAVAVNDALKNSTQLVVEAGTGTGKTFAYL
APALKSKGKTIISTGSKALQEQLYHRDLPQLVKALNASKKTALLKGRANYLCTYRLNQHV
AHVPTDDPDVMHQLAMVAKFASETQSGDLADCIGIEEDAKVLPYVNSTADNCLGKECPDF
QSCYIRKARLNAAEADVVVINHHLFFADMAVKDSGFAELMPTADAYIFDEAHQLSEIASD
YFGESISTKKLVDLINDLRAIYRAEIPDMLQLGKSLNKLETSVADLRLQFGVDGSRGDWR
EKLSDKLICAALHRVISDLDFVYQVLKLCLERSDKIEHPFERTLAFKGQLERVFDTAQTG
FSYWYETTRRYLTVNITPLNVSAKFAQMMKDTGAGFVFTSATLSVDNKLDHFNASLGITP
VQSMMVDSPFDYPNQALLCLPRYLPESHAENMPHAIIKLTLELIKSAKGRCFVLFTSYRM
MHLVAEGLTTQMDYPVYMQGQMSKRIILEKFTRHGNAVLLGTASFWEGVDVRGSTLSCVI
IDKLPFAAPDDPLLQAKMQDCQMQGKDPFAHIQLPQAVIALKQGVGRLIRDNKDKGVLVI
CDNRLVTRQYGQVFLKSLPPMRRTRSLEDANTFLKHIN
NT seq 1917 nt   +upstreamnt  +downstreamnt
gtgactggtattatcaaacagctgtttagtgcaaccgggccgttagcgttatctctagat
ggatacacgcctcgccaacctcaaattgatatggccgttgccgttaacgatgcattaaaa
aatagcacgcagttagtggttgaggcggggactggtacaggtaaaacgtttgcctattta
gcgcctgcccttaaatctaagggtaaaacaattatttcaacaggctctaaggccttgcag
gagcagttataccaccgtgatttacctcagctagtaaaagcacttaatgcatctaaaaaa
accgcattgttaaaagggcgtgctaattacctgtgtacttacagattgaaccagcatgta
gcccatgtacctacagatgaccccgatgtaatgcatcagcttgccatggttgcaaaattt
gccagtgaaacacagtcgggggatttagctgattgtattggtattgaagaagatgccaaa
gtactgccctatgtaaactcaactgctgataactgcttaggcaaagagtgtccagacttt
caatcatgttatatacgcaaagcgcggttaaatgctgccgaagcggatgtagtggttata
aatcatcatttattttttgccgatatggcagtaaaagattccggttttgccgaacttatg
cccactgccgacgcttatatttttgacgaagcgcaccaattgagtgaaattgccagtgac
tactttggtgaaagcataagcaccaaaaagctggtggatttaattaacgatttacgcgct
atttaccgtgcagaaattcccgatatgctacagcttggaaaaagccttaataagcttgaa
accagtgtagccgacttacgtttacaatttggggttgatggtagccgaggtgattggcgc
gaaaagctcagtgataaattaatttgcgcagcgctacatcgggtgatcagcgatttagac
tttgtctaccaagtattaaagctatgcctagagcgtagtgataaaatagagcacccgttt
gagcgtacattagcgtttaaaggtcagttagagcgtgtttttgataccgcacaaacgggc
tttagctattggtacgaaaccacaaggcgttatttaacggttaatattacaccgcttaat
gtttctgctaaatttgcccaaatgatgaaagataccggtgcagggtttgtatttacctca
gctacactatcggttgacaataagctggatcactttaacgcaagtttaggcattacccca
gtgcaaagcatgatggtggatagcccctttgattatcctaatcaggcattattgtgctta
ccgcgctatttacctgaatcgcatgccgagaacatgccacatgcaattataaaattaacc
ctagaactgatcaaatcagctaaagggcgttgctttgtgttgtttaccagctaccgaatg
atgcatttagtggctgagggattaaccacacaaatggactacccagtttatatgcaaggg
caaatgtctaagcgtataatactcgaaaaatttacccgccatggtaatgcggtattgtta
ggtactgcttcgttttgggaaggtgttgatgtacgtggtagtacgctaagctgtgttatt
atcgacaagttaccttttgcagcaccggatgacccattgctgcaagccaaaatgcaagat
tgccaaatgcaaggcaaagacccgtttgcacatattcagttgccacaggctgtcattgcg
ctcaaacaaggtgtaggacgtttaatacgagataacaaagataaaggcgtgctggttatt
tgcgacaaccgattagtaacgcgccaatatggccaagtatttttaaaaagcttaccgccg
atgcgccgcacgcgaagcttagaagatgcaaacacatttttaaaacacattaactag

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