Pseudomonas sp. MT-1: MT1_0002
Help
Entry
MT1_0002 CDS
T10396
Name
(GenBank) type VI secretion protein
KO
K11901
type VI secretion system protein ImpB
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
MT1_0002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psmt02044
]
MT1_0002
Secretion system [BR:
psmt02044
]
Type VI secretion system
Imp/Vas secretion system core components
MT1_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
BAP77178
LinkDB
All DBs
Position
5378..5884
Genome browser
AA seq
168 aa
AA seq
DB search
MAKEGSVAPKERINVTFKPATGGAQEELELPLKLMVLGDFTQRADHRKIEDRKPIAIDKN
SFDEVLAKQELNLTFSVPNRLQDEPTDEELAVQLNINSMKDFNPANLVEQVPELKKLMEL
RDALVALKGPLGNAPAFRKAIESVLADDDSRDRVLGELGLAAKEQLDA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggctcggtagcccccaaagaacgcatcaacgtcaccttcaagcctgcc
accggcggcgctcaggaagaactcgaactgccactgaagttgatggtgctcggcgatttc
acccagcgtgccgaccatcgcaagatcgaggaccgcaagccgatcgccatcgacaagaac
agcttcgacgaggtcctggccaagcaggagctgaacctcactttctcggtgccgaaccgt
ctgcaggacgagcccaccgatgaagagctggccgtgcagctgaatatcaactcgatgaag
gacttcaacccggccaacctggtcgagcaggttcccgaattgaaaaagctgatggaactg
cgcgacgcgctggtcgccctcaagggcccgctgggtaacgccccggccttccgcaaagcg
attgaaagcgtgctcgccgacgacgactcgcgtgaccgtgtactcggtgagctgggtctc
gccgcgaaagaacaattggacgcctga
DBGET
integrated database retrieval system
