Pseudomonas sp. MT-1: MT1_0176
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Entry
MT1_0176 CDS
T10396
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03030
DNA replication
psmt03410
Base excision repair
psmt03420
Nucleotide excision repair
psmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MT1_0176
03410 Base excision repair
MT1_0176
03420 Nucleotide excision repair
MT1_0176
03440 Homologous recombination
MT1_0176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmt03032
]
MT1_0176
03400 DNA repair and recombination proteins [BR:
psmt03400
]
MT1_0176
Enzymes [BR:
psmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MT1_0176
DNA replication proteins [BR:
psmt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MT1_0176
DNA repair and recombination proteins [BR:
psmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MT1_0176
NER (nucleotide excision repair)
GGR (global genome repair) factors
MT1_0176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
BAP77352
LinkDB
All DBs
Position
complement(187849..190593)
Genome browser
AA seq
914 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD
AKGPTFRDTLFAEYKSHRPPMPDDLRGQVEPLHASVRALGMPLLCVDGVEADDVIGTLAR
QCAALGRDVIISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKNKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGIEGGIKGLYENLDKVCDLPIRGAKSLGAKLEEHRDA
AFMSYELATIKIDVPLDVQVGDLMPGEPHREALIALYRELEFKNWLDDLLREAKAAGEDC
EVQPEGCSIQAEAEYSTIFEQAEFAAWLEQLKAADCFAFDTETTSLDAQKAQLVGVSFAI
EAGKAAYVPLAHSYMGVPQQLDRDAVLADLKPLLEDPSKRKICQHGKYDMNVLMHYGIEM
RGMTFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAVEQAG
PYAAEDADVTLRLHQTLMSKLEATPSLLKILNEIEMPLVPVLARIERNGALVDANLLGMQ
SVELGNKLVELEREAFEIAGEEFNLGSPKQLCAILYDKLGCPVLSKTAGGQPSTAESVLA
ELAERDYPLPKVIMHHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGLLYAFQNDLDVH
RATAAEVFGIELDQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVSRGEAQAYIDRYFAR
YPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDNWLQESGLDARVILQVHDELVVEVREDLVEQVREQILPLMSGAAQLDVPL
LVEAGVGNNWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgttctggtggacggttcgtcctacctctaccgcgccttccac
gccctaccgccgctgaccacctcgaccggcaagcccaccggggcggtcaagggcgtgctg
aacatgctgctgtcgctgcgccggcaatacccggacagccccttcgcggtggtcttcgat
gccaagggcccgaccttccgcgacacgctgttcgctgaatacaaatcccatcgtccaccg
atgcccgacgacctccgcggtcaggtcgagccgctgcatgccagcgtccgcgcccttggc
atgccgctgctgtgcgtcgacggcgttgaagccgacgacgtgattggaacactggcgcgc
caatgtgcggcgctgggacgcgacgtgatcatctccactggcgacaaggacatggcgcag
ctggtgtgtccgcatgtcaccctggtcaacaccatgaccggcagcgtctatgacattgaa
ggcgtgaagaacaagttcggcgttggcccggagctgatcatcgacttcctcgccctgatg
ggcgacaaggtcgacaacatccccggcgttcctggcgttggtgagaagaccgcctgcggc
ctgctcaacggcatcgaaggcggcatcaaggggctctacgagaacctcgacaaggtttgc
gacctgccaatccgcggcgccaagtcgctgggtgccaagctcgaggaacatcgtgacgcc
gcgttcatgtcctacgagctggcgaccatcaagatcgatgtgccgctggacgtgcaggtc
ggcgacctgatgcccggtgagccgcaccgcgaggcgctgatcgccttgtatcgcgagttg
gagttcaagaactggctcgacgatctgctgcgtgaagccaaggccgccggagaggattgc
gaggtgcagcccgagggctgttcgatccaggctgaagccgagtacagcacgattttcgag
caagccgagttcgccgcctggcttgaacaactgaaggccgccgattgcttcgccttcgac
accgaaaccaccagcctcgatgcgcagaaggcacagctggtgggcgtgtcatttgccatc
gaggcgggcaaagcggcgtacgtaccgctggcccacagctacatgggcgtgccgcagcag
ctcgatcgcgatgccgtgctcgccgacctcaagccgctgctggaagacccgagcaagcgc
aagatctgccagcacggaaaatacgatatgaacgtgctgatgcactacggcatcgagatg
cgcggcatgacgttcgacaccatgctcgaatcctacgtgctcgacgccaccgcgacccgt
catgacatggacagcctggcgctcaagtacctgggccgcggcaccatccgcttcgaggat
atcgccggcaagggcgccaagcagctgaccttcgaccagatcgccgtcgagcaggcggga
ccctacgccgccgaagacgccgacgtcaccctgcgcctgcaccagactttgatgagcaag
ctcgaggccacgccctctctgctcaagatcctcaacgagatcgagatgccgttggtgccg
gtgctggcacgcatcgagcgcaacggcgcgctggtcgacgccaatctgctcgggatgcag
agcgtcgagctcggtaacaagctggtcgagctggagcgtgaggcgttcgagatcgccggt
gaggaattcaacctgggctcgccgaagcagctctgcgcgatcctctatgacaagcttggc
tgcccggtgctgtcgaagaccgctggcggtcagccgtctacggcggaaagcgtgctggcc
gagctggctgagcgggactacccgctgcccaaggtgatcatgcatcaccgtagtttgagc
aagctcaaaggcacctacaccgacaagctgccgcagcagatcaatccgcgtaccggacgg
atccacaccagctaccaccaggccgtgaccgcgaccggacggttgtcctccagcgatccg
aacctgcagaacatcccgatccgcacggcagaaggccgccggatccgtcaggcctttgtc
gcggcgccgggttacaagctgctggccgcggactattcgcagatcgagttgcgcatcatg
gcgcacctggcgcaggacgccgggctgttgtacgccttccagaacgacctggacgtccac
cgtgccacggcggccgaagtgttcggcatcgagctggaccaggtcagcaacgatcagcgg
cgcagcgccaaagcgatcaacttcggcctgatctatggcatgagcgcctttggcctggcc
aagcagatcgacgtttcgcgtggcgaagcacaggcctatatcgaccgctactttgcccgc
taccccggcgtgctcgcctacatggaacgcacccgcacccaggccgcggagcagggctat
gtggagacgctgttcggccggcggctgtatttacccgagatcaactcgaagaatggcgcc
atgcgcaaaggtgccgagcgcacagcaatcaacgcgccgatgcagggcaccgcggcggac
atcatcaagcgtgccatgatcgcggtggacaactggctgcaagagagcgggctggatgcg
cgcgtcatcctgcaggtgcacgatgaactggtggtcgaggtccgtgaggatctggtcgag
caggttcgcgaacagattcttccgttgatgagcggagcagcccagctggacgtgccgctg
ctggtcgaggcgggcgtcggcaataactgggacgaggcgcactga
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