Pseudomonas sp. MT-1: MT1_0295
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Entry
MT1_0295 CDS
T10396
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MT1_0295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmt03400
]
MT1_0295
DNA repair and recombination proteins [BR:
psmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MT1_0295
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_13
AAA_29
ABC_tran
AAA_16
AAA_27
DUF2813
NACHT
Motif
Other DBs
NCBI-ProteinID:
BAP77471
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Position
complement(312190..313302)
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AA seq
370 aa
AA seq
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MSLSRISVTGIRNLQPVTLNPSPRINILYGDNGSGKTSFLEAIHLLGMARSFRSTRLTPV
ISHEHSSCTVFGQVELADEQSTALGISRDRSGDVRIRINGQSVRSAAELAETLPLQLINP
DSFRLLEGAPKLRRQFLDWGVFHVEPRFLHAWQRLQQALRQRNSWLRHGTLDSASQAAWS
RELSAASEEIDGYRRAYIQALKPIFEVTLAALLDLHGFQLSYYRGWDKGRSLAEVLSVSI
ERDRLMGHTQAGPQRADLRLRVANHNAAETLSRGQQKLVVCALRIAQGHLVSEAKRGQCI
YLVDDLPSELDDQHRLALCGLLEQLNCQVFITCVDSNVLREGWRQGTPVSMFHVEHGAIA
QDHGPSGVKA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttagccgcatctccgtcaccggcatacgtaacctccagccggtgacgttaaac
ccctccccccggatcaacatcctctacggtgataacggtagcggaaaaaccagttttctc
gaggcgatccatctcctcggaatggcgcgctcgttccgcagcacgcgtctgacgccggtc
ataagccacgagcattccagttgcacggtctttggtcaggtcgaattggctgatgagcag
tcaaccgccctcggcatctctcgagatcgcagcggcgacgtgcggatcagaatcaatggg
cagagcgttcgaagcgcagcggaactcgctgagacgttaccgttgcagttgatcaatccg
gacagttttcgcttgctcgaaggtgcccccaagcttcgccggcagtttttggattggggg
gtgttccacgtggaaccccgattcctccacgcttggcagcgtctgcagcaggccttgagg
caacgaaactcgtggctgcgtcatggtacacttgactccgcttctcaggcggcttggagc
cgcgagcttagcgccgcgagtgaggaaatagacgggtacaggcgggcttacattcaagcg
ctgaaaccaatattcgaggtcacgttggccgcgcttttggatcttcacggtttccagttg
agttattaccgtggctgggacaaaggccgttccctggctgaggtgttgtcggtgtccatc
gaacgcgacaggctcatggggcatacccaggcgggtcctcagcgggctgacctccgattg
cgggttgccaaccataatgctgcggaaaccctttctcgtggccagcagaaactggttgtg
tgcgcgttacgtattgcgcagggccatctggtcagtgaagccaaacgaggccagtgtatt
tatctggttgatgacctaccgtccgagttggacgatcagcaccggctggcattgtgcggg
ttgctggaacagctgaattgccaggtgtttatcacctgcgttgattcgaacgtattgcga
gaaggttggcgtcaaggtacgccagtctcaatgtttcacgtggaacatggtgcgatagcc
caggaccacggcccctcgggagtgaaggcatga
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