KEGG   Pseudomonas sp. MT-1: MT1_0655
Entry
MT1_0655          CDS       T10396                                 
Name
(GenBank) alginate biosynthesis transcriptional regulatorAlgB
  KO
K11384  two-component system, NtrC family, response regulator AlgB
Organism
psmt  Pseudomonas sp. MT-1
Pathway
psmt02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psmt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MT1_0655
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psmt02022]
    MT1_0655
Two-component system [BR:psmt02022]
 NtrC family
  KinB-AlgB (alginate production)
   MT1_0655
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA cREC_REC AAA_2 AAA_22 Mg_chelatase AAA_16 nSTAND3 HTH_17 VpsR Xre-like-HTH AAA_19 MCM DUF815 IstB_IS21 HTH_psq HTH_23 HTH_28
Other DBs
NCBI-ProteinID: BAP77831
LinkDB
Position
complement(712226..713572)
AA seq 448 aa
MDQTTDTGGRILLVDDEAAILRTFRYCLEDRGYTVVTAASASQAEAILQRQVFDLCFLDL
RLGEDNGLDVLQQMRVLAPWMRVVIVTAHSAVDTAVDAMQAGAADYLVKPCSPEQLRLSA
AKQLEVRQMAARLEALEGEVQKRSDALGSYSPAMMSVLETARQVADTDANILILGESGTG
KGELARAIHNWSRRSKKAFITINCPSLSADLMESELFGHNRGAFTGATESTLGRVNQADG
GTLFLDEIGDFPLALQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRDGRF
REDLLYRLNVITLNLPPMRERPEDVLTLAERFLAFFVKSYGRPARGFSDNAVAALKAYRW
PGNVRELRNVVERASIICPQDMIEVSHLGLADQAVSNAPRIGEPLSLEALEKAHISGVLS
TSDTLEQAARILGIDASTLYRKRKQYGL
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaccaaacgaccgacaccggcggccgcatcctactggtagacgacgaggcagcgatc
ctgcgcacgttccgctactgcctcgaggaccgcggttatacggtggtcacggcggccagc
gcttcacaggccgaagcgatcctgcagcggcaggtgttcgatctgtgctttctggacctg
cgcctcggtgaagacaacggtctcgatgttctgcagcagatgcgcgtacttgcgccgtgg
atgcgtgtagtaatcgtcaccgcccattcggccgtggacaccgcggtggacgcgatgcaa
gcgggcgctgcggattacttggtcaagccatgcagccccgagcagctgcgcctgtcggcc
gccaagcagctggaagtccgtcagatggcagcgcggctggaggccctggaaggcgaggtg
caaaaacgcagcgatgcgctgggctcgtacagcccggcgatgatgagcgtgctggagacc
gcccgccaagtggccgataccgacgcgaacattctcatcctcggtgagtcaggcacgggc
aaaggcgagctggcgcgtgcgattcacaactggagccgccgctctaaaaaagccttcatc
accatcaactgtccgtccctgtcggctgatctgatggaaagcgagctgttcggacacaat
cgtggcgctttcaccggggctaccgaaagcaccctgggacgcgtcaaccaagccgacggc
ggcacgctgtttctcgacgagatcggcgacttccccctcgctttgcagccgaaactgctg
cgtttcatccaggacaaggaatacgagcgcgtcggtgacccggtcacccggcgggccgac
gtgcgcattctcgccgccaccaatttgaatctcgaggaaatggtccgcgatgggcgtttc
cgtgaagacctgctctaccgtctgaatgtcatcaccctgaaccttccacccatgcgcgag
cgcccggaagacgtgctgaccctcgccgagcgcttcctggcgttcttcgtaaaaagctat
ggccgaccagcgcgcggcttcagcgacaacgcggttgccgcactgaaggcctatcgctgg
ccaggcaacgtccgtgagttgcgcaacgtggtcgagcgcgccagcattatctgcccgcag
gacatgatcgaagtcagccatcttggcctggccgatcaggccgtcagcaacgccccacgg
atcggtgagccgctcagtttggaagcgctggaaaaagcacatatctcgggcgtattgagc
accagcgacacacttgagcaagccgcccgaattcttggcatcgacgcgtcgacgctttat
cgaaaacgtaagcaatacggcctatga

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