Pseudomonas sp. MT-1: MT1_0676
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Entry
MT1_0676 CDS
T10396
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MT1_0676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmt03400
]
MT1_0676
Enzymes [BR:
psmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MT1_0676
DNA repair and recombination proteins [BR:
psmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MT1_0676
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
AAA_22
SLFN-g3_helicase
UvrD_C
nSTAND3
AAA_16
CbiA
AAA_28
DEAD
nSTAND_NTPase5
T2SSE
Flavi_DEAD
DUF87
ATPase
Motif
Other DBs
NCBI-ProteinID:
BAP77852
LinkDB
All DBs
Position
742457..744379
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AA seq
640 aa
AA seq
DB search
MAEAGRSLLHAEVLPDPARVEGCVMALLSDLPFGPLERAFIASLQRLEPEVSDMVLLAAA
LCCEALASGDVCLPLQRFAGKRPWPEVDLSLPPLAQWHAQLKASSLIGGPGDYAPLILMG
NRLYLARYQAYEQQLAEQLLARAADAPAVDEKQLSASLARLFAFNQESPDWQRLAAAQAV
RRRLAVISGGPGTGKTTTVVRLLAALLEQPGGERLAIGLAAPTGKAAARMAEAIRNAKAD
LPVSDAVKDALPDEARTLHRLLGSRGDSPKVRHDAANPLALDVLVVDEASMVDLALMAKL
VAALPPKARLILLGDKDQLAAVEAGAVFAELCEGRGFDSQAAADLQRITGQAVPIERPRS
RLGDAVVLLTHSHRFAGDSGIGELARRINGGDAKGTIALLQEGRADLAWNATPTSAVLIE
RLEQGYSPYLQAARQADPAAAFEAFNGFRALTAQRDGPFGVTGINEALEARFKRRLGVPA
RERWYPGRAVMVRQNDYALGLFNGDIGLCLKTEQGLRVFFEGDEGYRGFAPARLPSHDSA
FAMTVHKSQGSEFTEVLLALPEQPSPLLTRSLFYTGITRAKRKVEIWALPVRLGEAVSTR
AERAAGLAERLSLGDTKRTGEGDGLPKPTSEPAGDQLSLF
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaggcgggccgcagtctgctccatgctgaagtgctgcctgaccccgcccgcgtg
gagggatgtgtgatggcattgctttcagacctgccgttcggccccttggagcgcgctttc
atcgcgagtctgcagcgtctcgagcctgaggtgtctgacatggtcctgctcgccgccgcg
ctttgctgcgaggccctggcgtccggggatgtctgcctgccgcttcagcggttcgccggc
aagcgtccctggcctgaagtcgatctcagcctgccaccactggcgcagtggcacgcgcag
ctgaaggcctcgtccctgatcggcgggcccggcgattacgcgcccttgatcctcatgggg
aatcggctctatctggcccgttatcaagcatacgaacagcagctggccgaacaactgctg
gcccgcgcggcggatgcgccagcagtggatgaaaaacaactgagcgccagcctggcgcgc
ctgttcgctttcaaccaggagagccccgattggcagcgcctcgcggcagcacaggcggta
cgccggcgactggctgtgatctccggtggtcccggtaccggcaagaccaccaccgtggta
cgcctgctggcggcgttgctcgagcagcctggcggcgagcgcctggccatcggcctcgcg
gcacctaccggcaaagcggcggcgcgcatggccgaagcgatccgcaacgccaaggccgat
ctgccggtcagtgatgccgtcaaggacgccctgccggacgaggcgcgcacgctgcaccgc
ctgctcggcagccgcggtgacagcccgaaggtgcggcatgacgcagcgaacccgctggcg
ctggatgtgctggtggtggacgaagcgtcgatggtcgacctggcattgatggccaagctg
gtcgctgcgctgccgccgaaggcaaggctgatcctgctcggcgacaaagaccagctggcc
gccgtggaagccggcgcggtgttcgccgagctttgtgaggggcgcggtttcgatagccag
gccgcggccgatctgcaacgcattaccgggcaggccgtaccgatcgagaggccgcgctcg
cgtctgggcgatgcggttgtgctgctcacccacagccaccgcttcgccggcgacagcggt
atcggcgagttggcgcggcgaatcaatggcggcgatgccaagggcacaattgcactgctg
caggaagggcgcgccgatcttgcctggaatgccacgccaacgtccgccgtactgatcgaa
cgattggagcagggctattcgccctatctgcaggctgcacggcaagccgatccggcggcc
gccttcgaggccttcaatggctttcgggcgctgaccgcccagcgcgatgggcctttcggc
gtcaccggcatcaacgaggcactggaagcgcgcttcaagcgccgcctcggtgtgcccgcc
cgcgaacgctggtaccccggccgcgcggtgatggtccggcagaacgactacgccctgggc
ctgttcaacggcgatatcggcctgtgtctgaaaaccgagcagggcctgcgggtgttcttc
gagggcgacgagggctatcgcggcttcgccccggcacggttgccgagccacgacagcgcc
ttcgccatgaccgtgcataaaagccagggctcggagttcaccgaggtgctgctggcgttg
ccggaacagcctagcccgctgctgacccgctcgctgttctacaccggcatcacccgtgcc
aagcgcaaagtggagatttgggcgctgccggtgcgtctgggtgaggccgtaagcacccgc
gccgagcgcgcggcgggactagctgaacggctgagcctaggcgacacgaagcgcacaggc
gagggggatggcctgccgaagccgaccagcgagccggcgggcgatcagctcagcctgttc
tga
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