Pseudomonas sp. MT-1: MT1_0780
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Entry
MT1_0780 CDS
T10396
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03018
RNA degradation
Brite
Enzymes [BR:
psmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MT1_0780
Messenger RNA biogenesis [BR:
psmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MT1_0780
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GFIT
Other DBs
NCBI-ProteinID:
BAP77956
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Position
complement(863659..865485)
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AA seq
608 aa
AA seq
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MSFASLGLSEALAGAVEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPVL
EILFPGGHPDREHRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLPLKSAVIFGGVGMN
PQVQAIAKGLDVLVACPGRLLDLANQKAVDLSHVEILVLDEADRMLDMGFIHDVKKVLAK
LPTKRQNLLFSATFSKDITDLASKLLHEPEKIQVTPPNTTVERIEQRVFRLPSTHKRALL
AHLITKGAWEQVLVFTRTKHGANRLAEYLDKHGLPAVAIHGNKSQNARTKALADFKANEV
RILVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKGIERMTKQKIPDGDLLGFDASTIEAEKPEVREPRQPRPARNSERKPRGERAAKTTETA
ASEPKAGDRNRRGRNKPRSARPAQGSAEQTAAAPVSRPPRLPNDRAPDEFLDDEVDNFGN
SVDYVSPYQNKQGRGRRPGAPAQPAQPASQPRAAAAPRSGAASAGAQGKGKRQGQPARGA
QPRRKNEGRRIDGDSGGARRDVAEKPKEKQPVIIHKESKLDRLPSIEQLEQLPAKPRGEK
PALLTRNR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgcttccctcggtctctccgaggctttggccggtgccgtcgaggccgccggt
tacacccagcctacaccggtgcaacagcgggccattcccgccgtgttgcaaggacgcgac
ctgatggtcgctgcacagacgggaaccggcaagaccggtggctttgccctccccgtactc
gaaattcttttcccgggcggccatcctgaccgcgagcaccgccacggtccgcgccagccg
cgcgtactggtgctgacgccgacacgcgagctcgccgcccaggtacacgatagcttcaag
ctgtacgcccgcgacctgccgctgaaaagcgcggtgatcttcggaggcgtcggcatgaac
ccgcaggttcaagccattgcaaagggcctcgacgtgcttgtcgcctgcccgggccgcttg
ctcgacttggcgaaccagaaagccgtcgacctttcccacgtggagattctggtcctcgac
gaagccgaccgcatgctcgacatgggctttatccatgacgtcaagaaggtcctcgccaag
ctgccgaccaagcgccagaacctgctgttctcggcgaccttttccaaggacatcaccgac
ctcgccagcaagttgctgcacgagccggagaaaatccaggtcacaccgccgaacacgacc
gtcgagcgtatcgagcagcgtgtttttcgtctgccatccacgcacaaacgcgccctgctg
gcccatctgatcaccaaaggcgcctgggaacaggtgctggtgttcacccgcaccaagcac
ggcgccaaccgccttgccgagtatctcgacaagcacggcctgccagcagtggcgattcac
ggtaacaagagccagaacgcacgtaccaaggcgctggcggatttcaaggccaacgaggta
cgtatcctggtcgccaccgatatcgccgcgcgcgggctggacatcgaccagttgcctcac
gtggtcaacttcgagctgccgaacgtcgaggaagactacgttcaccggatcgggcgtaca
ggtcgggctggccgcagcggtgaagcgatttcgctggttgcacccgacgaggaaaaactg
ctcaagggcatcgagcggatgaccaagcagaagattccggacggcgatttgctgggcttc
gacgccagcaccatcgaagcggagaagccggaagtccgtgagccacgccagccacgtcct
gctcgcaacagtgaacgcaaacctcggggcgagcgcgctgccaaaaccaccgaaactgca
gccagcgagccgaaagcgggcgaccgcaaccgtcgcgggcgcaacaagccgcgcagtgcg
cgtccagctcagggctcagcagagcagacagctgcagctccggtgagccgtccgcctcgc
ctaccgaatgatcgcgctccggacgaatttcttgatgacgaagtcgataacttcggcaac
agcgtcgactatgtcagtccctaccagaacaagcagggacgtggccgtcgtcccggcgcg
ccggctcaaccggctcaaccggctagccagccacgtgccgcggcagccccacgcagcggc
gctgccagtgcaggcgctcaaggtaaaggcaagcgtcaagggcagcctgcacgtggcgcg
cagccacgccgcaagaacgaagggcgtcggatcgacggtgatagcggtggtgcccgccgg
gacgttgcggagaagccgaaggaaaagcagccggtcatcatccacaaggagtcgaaactg
gaccgactgcccagcattgagcagttggaacagctgccggccaagcctcgcggcgagaag
ccggcattgctgacccgcaatcgctga
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