KEGG   Pseudomonas sp. MT-1: MT1_0821
Entry
MT1_0821          CDS       T10396                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psmt  Pseudomonas sp. MT-1
Pathway
psmt02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psmt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MT1_0821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psmt03021]
    MT1_0821
Transcription machinery [BR:psmt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MT1_0821
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_24 Rv2175c_wHTH HTH_31 Sigma70_r3 HTH_5 HTH_17 PhyR_sigma-like HTH_11 FaeA HTH_10 EAP30 EutK_C
Other DBs
NCBI-ProteinID: BAP77997
LinkDB
Position
complement(909644..910159)
AA seq 171 aa
MSAGSTHQQFVGLLYRDHRDWLLNWLRRQQACPHRAEDLSQDTFLRLLKRDDIGDLREPR
TLLATIARGLLIDHFRRSALERTYLDELALQPEDTQPSAEDQLQVLQALREVNLMLGALS
ANARAAFFYNRLDGLTHAEIASRLGVSVPRVRQYLAQALRQCYIAVYGEPR
NT seq 516 nt   +upstreamnt  +downstreamnt
ttgtcggctgggtcgacccatcaacagttcgttggcttgctgtatcgcgatcatcgcgat
tggctgttgaactggctgcgccgccaacaagcgtgtcctcatcgcgccgaggacctgagc
caggacaccttcctgcggctgctcaagcgtgacgatataggcgatctacgtgagccacgc
actttgctggcgacgatcgctcgtggcctgttgatcgatcattttcgtcgcagcgcgctg
gagcgcacctatctcgatgagctggcactgcagccggaagacacgcaacccagcgccgag
gatcagctgcaagtgctccaggcattgcgcgaagtgaacctcatgctcggtgcgctctcg
gctaatgcacgtgcagccttcttctataaccgcctggacggcctgacccacgccgaaatt
gcgtcgcgcctcggcgtctccgttccacgcgtaagacagtacctcgcccaggctctgcgc
cagtgttatatcgccgtttacggtgagcctagatga

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