Pseudomonas sp. MT-1: MT1_0821
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Entry
MT1_0821 CDS
T10396
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MT1_0821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psmt03021
]
MT1_0821
Transcription machinery [BR:
psmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MT1_0821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
Rv2175c_wHTH
HTH_31
Sigma70_r3
HTH_5
HTH_17
PhyR_sigma-like
HTH_11
FaeA
HTH_10
EAP30
EutK_C
Motif
Other DBs
NCBI-ProteinID:
BAP77997
LinkDB
All DBs
Position
complement(909644..910159)
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AA seq
171 aa
AA seq
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MSAGSTHQQFVGLLYRDHRDWLLNWLRRQQACPHRAEDLSQDTFLRLLKRDDIGDLREPR
TLLATIARGLLIDHFRRSALERTYLDELALQPEDTQPSAEDQLQVLQALREVNLMLGALS
ANARAAFFYNRLDGLTHAEIASRLGVSVPRVRQYLAQALRQCYIAVYGEPR
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggctgggtcgacccatcaacagttcgttggcttgctgtatcgcgatcatcgcgat
tggctgttgaactggctgcgccgccaacaagcgtgtcctcatcgcgccgaggacctgagc
caggacaccttcctgcggctgctcaagcgtgacgatataggcgatctacgtgagccacgc
actttgctggcgacgatcgctcgtggcctgttgatcgatcattttcgtcgcagcgcgctg
gagcgcacctatctcgatgagctggcactgcagccggaagacacgcaacccagcgccgag
gatcagctgcaagtgctccaggcattgcgcgaagtgaacctcatgctcggtgcgctctcg
gctaatgcacgtgcagccttcttctataaccgcctggacggcctgacccacgccgaaatt
gcgtcgcgcctcggcgtctccgttccacgcgtaagacagtacctcgcccaggctctgcgc
cagtgttatatcgccgtttacggtgagcctagatga
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integrated database retrieval system