Pseudomonas sp. MT-1: MT1_0926
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Entry
MT1_0926 CDS
T10396
Name
(GenBank) PAS domain S-box/diguanylate cyclase (GGDEF)domain-containing protein
KO
K21025
multidomain signaling protein FimX
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
MT1_0926
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_4
PAS_8
Response_reg
PAS_9
FleQ
DUF2515
DUF3646
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
BAP78103
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Position
complement(1039440..1041506)
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AA seq
688 aa
AA seq
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MAPQKKTIRLLILEDSQNEAERLVSLFRNAGQATRVHRLTSSEDLADALQQTWDLLINAP
SSVNLDPSEAISAIRKQAKDIPVIQLIEGNDTDAITEALTLGAQGALPQGEDEWLILVAS
RELANLEERRARRSAELALREAEKRCQLLLESSVDAIAYVHDGMHIYANRAYLELFSYED
VEELEGMPMIDLIASCDQGEFKGFLKNYQSLQGGAELVCGGIRADGSSFKASMHFSPASY
DGEPCIQAVIRAESDNAELEKLREISSQDLVTGLYNRNHFLESLDGAVERAVNAGESSSL
AYIRIDRFASLQAEIGLGDSDRLLAELAQLLRAQFTEQAELARFSDDAFAVLMAEATPKQ
LEQPLTELLRKVEGHLFDVGGRTIQTSLSIGVAALDEQTAKARDVIDRAHRCAEELTDGN
ALRTYDPARELAAAASRGNVLAMLQQALEKNSFRLLFQPIISLRGDSHEHYEVLLRLLDP
EGTEVPPGEFLDAAKEAGLATKIDRWVLLNSIKLLAEHRNKGHSTRLMVHLSGPSLQDPS
LLGWLGVALKASKLPPDSLVFQLDENDAVAYLRQAKALTQGLVGLGCRVALNQFGCVLNP
LNTLKHLNADFVKIDGSYTQDLSRQENQEALKQLLAQLHEQAKQTIVPFVDSATVLATLW
QAGVGYIQGQYLQGPSQSMDYNFSSDED
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcaaaagaaaaccatccgcctgctgatcctcgaggattcgcagaatgaagct
gagcgactggtcagcctgtttcgtaacgcgggccaggcgacgcgcgttcatcgcttgacc
tccagcgaagacttagccgatgcactgcagcagacctgggatcttctgatcaatgcgccg
tccagcgtcaacctcgatcctagcgaagcaatcagcgccattcgcaagcaagccaaggat
attccggtcatccagcttatcgagggcaacgacaccgatgcgattaccgaagccctcacc
ttgggcgctcagggcgcgctgccgcagggcgaggacgagtggctgatcctggtcgcgagc
agggaactggcaaaccttgaggagcgccgcgcacgccgctccgccgaactggcactacgc
gaagccgaaaagcgctgccagctgctgctggagagttcggtggatgcaattgcctatgtc
cacgacggcatgcatatctacgccaaccgggcgtatttggagctgtttagctacgaggat
gttgaagaactcgaaggcatgccaatgattgacctgatcgcttcctgtgatcagggcgag
ttcaaaggctttctgaagaactatcaaagcctgcagggcggcgccgaactggtctgcggc
gggattcgcgctgacggcagcagcttcaaggcaagcatgcacttttcgcctgccagctac
gatggcgagccgtgcatccaggccgtcattcgcgcagaaagcgacaatgccgagctggaa
aagctgcgcgagatcagcagccaggatctggtgaccggtctttacaaccgcaaccatttc
cttgagtcgctggacggcgcggtcgagcgcgccgtaaacgccggagagagttcgagcctc
gcctacatccgcatcgatcgtttcgccagcctgcaagccgagattggcctgggcgattcg
gatcgcttgctggccgaattggcgcagctgcttcgcgcgcagtttacggagcaggcggaa
ctggcacgcttcagtgacgatgcgttcgcggtactcatggcagaggccacgccaaagcaa
ctcgaacagcccctgactgagttgctacgcaaggtcgaagggcatcttttcgatgtcggc
ggccgcaccattcagaccagcctgagtatcggggtcgccgccctcgacgaacagactgcg
aaagctcgggacgtgattgaccgcgcccaccgctgcgccgaagagctgaccgatggcaac
gccctgagaacctacgatccggcccgcgaacttgcagccgccgctagccgcggcaacgtg
ctcgccatgctgcaacaggcgctggaaaagaacagcttccgcctgctgttccaaccgatc
atcagcctccgcggcgatagccacgaacactacgaagtgctattgcgtctgctcgaccca
gagggcaccgaggttccgccgggagagtttctcgatgccgctaaagaggcagggctggcc
accaagattgatcgctgggtactgcttaactcgatcaaactgctcgccgaacaccgcaac
aagggccacagcacgaggctgatggttcacctgtcaggacccagcctgcaggacccatca
cttcttggctggcttggcgtcgcactcaaggcttccaagctgccgcccgactcgctggtt
ttccaacttgacgaaaacgacgccgtcgcttacctgaggcaggccaaggcgctcacccag
gggcttgtcgggctcggctgccgcgtcgccctgaaccagttcggctgtgtgctgaatccg
ctcaatacactcaagcacctcaacgccgatttcgtgaagatcgatggctcctatacccag
gacctgagccgccaggagaatcaggaagcgctcaaacagctcctggctcagctccatgaa
caggccaagcagaccattgtgcccttcgtagacagcgccaccgtcctggccacgctctgg
caggcgggtgtcggctatatccagggccagtacctgcagggcccgagccagtcgatggat
tacaacttttcctccgacgaagattga
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