Pseudomonas sp. MT-1: MT1_1248
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Entry
MT1_1248 CDS
T10396
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
psmt Pseudomonas sp. MT-1
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psmt03019
]
MT1_1248
Messenger RNA biogenesis [BR:
psmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MT1_1248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
AAA_29
nSTAND_NTPase5
RsgA_GTPase
FtsK_SpoIIIE
T2SSE
ABC_tran
SKI
Rad17
Motif
Other DBs
NCBI-ProteinID:
BAP78425
LinkDB
All DBs
Position
complement(1382079..1382936)
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AA seq
285 aa
AA seq
DB search
MRLIIVSGRSGSGKSTALNVLEDNGFYCIDNLPAGLLPELAERALLHTELLQPQVAVSID
ARNLPSQLKRFPELLEDVRARYIQCDVLYLDAADETLLKRFSETRRRHPLTNQNRSLAEA
IRDEELLLAPIIDHADLKIDTTHLNLYQLRDTLKLRLLDKPEPGTAFLFESFGFKRGMPV
DADLVFDVRCLPNPYWKADLRDFSGLDQPVVDYLTAQTDVEEMFQDILAYLSKWLPRFAA
SNRAYVTVAIGCTGGHHRSVYLAERLCHALRAPLKNVQVRHRDLA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcggttaatcatcgtcagtgggcgctctggatcgggcaagagcactgcgctaaatgtc
cttgaagacaatggtttctactgtatcgacaaccttcccgccggccttctgccagagctg
gcagaaagggcactgttgcacacagagctgctgcagccacaagtcgcggtatctatcgat
gcgcgcaacctgccgagtcaactaaaacgctttcccgagctgctagaagatgtccgtgcc
cgatatatccagtgcgatgtactgtatctcgatgccgccgacgagacattgctcaagcgc
ttttcggagacccgtaggcggcatccgctgaccaaccagaaccgctccctggccgaagcc
atccgtgacgaagaactgcttctggcgcctatcatcgatcacgccgacctgaagatcgac
accacacacctgaatctttatcagctacgagacacgctgaagctgcgcctgctggacaag
ccagagccgggtacggcttttctcttcgagtcctttggctttaaacgaggtatgccggtg
gacgccgatctggtattcgatgtgcgctgcctgcccaatccctactggaaggccgatctg
cgcgatttctccggactggatcagcctgttgtcgattatctcactgcacaaacggacgtc
gaggaaatgttccaagacatcctggcctacttgagcaaatggcttccccgcttcgccgcc
agcaaccgcgcctatgtcacggtcgccattggctgcaccggtgggcaccaccgctcggtc
tatctggccgagcggctctgtcatgcgctgcgcgcacctctaaagaacgtccaggtccgc
caccgcgacctggcttag
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