Pseudomonas sp. MT-1: MT1_2020
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Entry
MT1_2020 CDS
T10396
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt00020
Citrate cycle (TCA cycle)
psmt00190
Oxidative phosphorylation
psmt00650
Butanoate metabolism
psmt00720
Other carbon fixation pathways
psmt01100
Metabolic pathways
psmt01110
Biosynthesis of secondary metabolites
psmt01120
Microbial metabolism in diverse environments
psmt01200
Carbon metabolism
Module
psmt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psmt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psmt_M00149
Succinate dehydrogenase, prokaryotes
psmt_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MT1_2020
00650 Butanoate metabolism
MT1_2020
09102 Energy metabolism
00190 Oxidative phosphorylation
MT1_2020
00720 Other carbon fixation pathways
MT1_2020
Enzymes [BR:
psmt01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MT1_2020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
BAP79198
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Position
2218748..2220520
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AA seq
590 aa
AA seq
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MASIRTLSYDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAAADRTGHALLHTLYQANLKAGTSFLNEWYGVDLVKNQDGAI
VGIIAICIENGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
LAGNGCGPDGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVTAPVPVVPTCHYMMG
GVATNIHGQAMTQDANGNDKIIEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALKDGIEHRGATEADLDVALSRLASLNERTEGEDVASLRKELQSCMQNYFGVFRTGE
YMQKGIAQLADLRQRIANVKISDKSQAFNTARIEALELQNLLEVAEATAIAAENRKESRG
AHAREDFEERDDENWLCHTLYFPGEKRVAKRAVNFSPKTVPTFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctagcattcgtactctttcttatgacgccatcattattggtggcggtggtgcgggc
atgcgcgccgcactgcagttggcccaaggtggtcacaaaactgctgtggtaaccaaggtt
ttcccgacccgctcgcataccgtatccgcacaaggtggcatcacctgtgcgatcgcttcg
gctgacccgaacgatgattggcgctggcacatgtacgataccgttaagggctccgattac
atcggcgaccaagatgctatcgaatatatgtgttccgttggtccggaggctgttttcgag
ctggaacacatgggcttgccgttctcccgaaccgagcagggtcgcatctaccagcgtccg
ttcggtggtcagtcgaaggactatggcaaaggtgggcaggctgctcgcacttgcgcggcc
gctgaccgtactggtcatgcgctgctgcacactctgtatcaggccaacctgaaggcgggc
acgtccttcctcaacgaatggtatggcgtggatctggtgaagaatcaggatggcgccatc
gtgggcatcatcgcgatctgcatcgaaaatggcgaaacggtctatatccggtccaaggct
gtggtcttggctaccggaggtgcagggcgtatctacgcatcgaccactaacgcgctgatt
aacaccggtgacggtattggcatggcgttgcgcgcaggtgtgccggttcaggatattgag
atgtggcaattccatccgaccggcatcgctggtgccggtgtgttggtaaccgaaggttgc
cgtggtgaaggtggatacctgatcaataagcacggcgagcgctttatggagcgttacgcg
ccgaacgcgaaagatctggcgggtcgtgacgtagttgctcgctccatggttaaagaaatt
ctggctggcaacggctgtggtccagatggcgatcacgtgatgctgaagctcgatcacctg
ggtgaggaagtactgcatagccgtctaccgggcatctgcgagctgtcgaaaacctttgcg
catgtcgatcctgtcactgctccggtgcctgtagttccgacctgtcattacatgatgggt
ggcgtcgccactaacatccacggtcaagcaatgacccaggatgccaatggaaatgacaag
atcattgaagggctattcgcggtaggcgaagtggcgtgcgtatcggttcatggcgctaac
cgtctgggtggcaactctctgcttgacctcgttgtattcggtcgcgccgccggtcttcat
ctagaaaaagcgctgaaggacggtatcgagcatcgcggtgcgactgaggccgatctggac
gttgcgctgagtcgtctcgccagcttgaacgagcggaccgaaggcgaagacgtcgcttcg
ctgcgtaaagagctgcaaagctgcatgcagaactacttcggtgtattccgtaccggcgag
tacatgcagaagggcattgcccagcttgctgatctccgccagcgcatcgccaatgtgaag
atttctgacaagagccaagccttcaataccgcccgtatcgaagcgctggagctacagaat
ctgctggaagtggctgaagcaactgccatcgctgcagagaatcgcaaagaatcgcgcggc
gcgcatgcccgcgaggatttcgaagagcgtgatgacgaaaactggctgtgccacaccctg
tacttcccgggtgagaagcgcgtagccaagcgtgccgtgaacttctctccgaagactgtt
ccgactttcgaacctaaggttcggacttactga
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