Pseudomonas sp. MT-1: MT1_2098
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Entry
MT1_2098 CDS
T10396
Name
(GenBank) isocitrate dehydrogenase NADP-dependent,monomeric type
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt00020
Citrate cycle (TCA cycle)
psmt00480
Glutathione metabolism
psmt00720
Other carbon fixation pathways
psmt01100
Metabolic pathways
psmt01110
Biosynthesis of secondary metabolites
psmt01120
Microbial metabolism in diverse environments
psmt01200
Carbon metabolism
psmt01210
2-Oxocarboxylic acid metabolism
psmt01230
Biosynthesis of amino acids
psmt04146
Peroxisome
Module
psmt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psmt_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MT1_2098
09102 Energy metabolism
00720 Other carbon fixation pathways
MT1_2098
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MT1_2098
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MT1_2098
Enzymes [BR:
psmt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
MT1_2098
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Gene cluster
GFIT
Motif
Pfam:
IDH
DUF1843
PDDEXK_15
DUF5363
Motif
Other DBs
NCBI-ProteinID:
BAP79276
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Position
complement(2304524..2306749)
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AA seq
741 aa
AA seq
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MSTRSKIIYTFTDEAPALATYSLLPIVEAFAASADIAVETRDISLAGRILASFADQLDAD
KVVDDDLAKLAELTNQPDANIIKLPNISASVPQLKAAIAELQALGYNLPNFPEDPQTEAD
KEVRARYGKVLGSAVNPVLREGNSDRRAPAAVKAFARKHPHSMGKWSKASQSHADYMRGG
DFFSSEQSITMEAAGDVRIEFVGKDGNVEVKKQLSLQEGEVLDGMFMSCNKLREFFEQTL
QDCKETGVMWSLHVKATMMKISHPIVFGHAVSVYYKDVFDKYGELFKELGVNPNNGISSV
YDKIKSLPDSQQEEILHDIHACYAERPEMAMVDSVKGITNLHIPSDVIVDASMPAMIRNS
GQMWGKDGKQKDTKAVMPESTYARIYQEMINFCKTNGAFDPVTMGSVPNVGLMAQKAEEY
GSHDKTFEMQADGIMRVVLADGTVLMQHPVEKGDIWRACQTKDAPIRDWVKLAVTRARQS
GTPAIFWLDPERAHDRELQKKVEAYLQEHDLSGLDIRIMGYNEAIRVSMERLIRGQDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLIEENHLR
WDSLGEFLALAVSLEETGIKTDNVKATLLGRTLDAATGKLLDNNKSPSRRTGELDNRGSH
FYLALYWAQELAAQTEDTQLQARFAPLAKQLQDNEQAILAELAEVQGKPVEIGGYYRSNP
ELTSKAMRPSATFNAALAALA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccgctcgaagattatctacaccttcaccgacgaagccccggcgctggccacc
tactcgcttctgccaattgtagaagcctttgccgcctccgctgatatagccgtcgaaaca
cgtgacatctctctcgcagggcgcattcttgcaagctttgctgaccagctggatgccgat
aaagtagtagacgatgacctggccaagcttgccgagctgacgaaccagccggacgccaac
atcatcaagctgcccaacatcagcgcctccgtacctcagctcaaggcggctatcgccgaa
ctgcaagccttgggctataacctccccaactttccagaagatccgcaaacagaagcggac
aaggaagtgcgtgcacgctacggcaaggtgcttggcagcgcggtaaaccccgtcttgcga
gaaggaaactctgatcggcgcgcaccagcggccgttaaagccttcgctcgcaagcacccg
cactctatgggcaagtggagcaaggcgtcgcagtcgcatgcggactacatgcgcggcggc
gatttcttctccagcgaacaatccatcaccatggaagcagccggcgatgtccgcatagag
tttgtcggcaaggatggtaacgtcgaggtgaagaagcagctttcgctacaagaaggcgaa
gtgctcgacggcatgttcatgagctgcaacaagctgcgcgaatttttcgagcaaacgctg
caggattgcaaagaaaccggcgttatgtggtccctgcacgtcaaggcgaccatgatgaaa
atctcgcatccgatcgtcttcggccatgccgttagcgtttactacaaggacgtcttcgac
aagtacggcgagctcttcaaagaactgggcgttaatccgaacaatggaatcagcagcgtc
tacgacaagatcaagtcgctgcccgactcccagcaggaagagatccttcacgacatccac
gcctgctatgccgagcgtcctgaaatggcgatggttgactctgtcaaaggcatcaccaac
ctgcacatcccgagtgatgtgatcgtcgacgcctccatgcccgccatgatccgcaattcg
ggtcagatgtggggcaaagacggaaagcagaaagacaccaaagcggtgatgccggagagc
acctatgctcgcatctaccaggagatgatcaacttctgcaaaaccaacggcgcctttgat
cctgtgaccatgggcagcgtaccgaacgttggcctgatggcacaaaaggccgaggagtac
ggctctcacgacaagaccttcgagatgcaagcggacggcatcatgcgtgtcgtgctggcc
gacggcaccgtactgatgcagcaccccgtggagaaaggcgacatctggcgcgcctgccag
accaaagacgcaccgattcgcgactgggtcaagctggccgttacccgcgcgcgccaatcg
ggcacgccggccatcttctggcttgacccagagcgcgcgcacgaccgtgaactgcagaag
aaggttgaagcctatctgcaggagcatgacctgagcgggctagacattcgcatcatgggc
tacaacgaagccatccgcgtgagcatggagcgcttgattcgtggccaggacaccatttcc
gtgaccggcaacgtgctgcgcgattacctgaccgacctgttcccgatcatggaactcggc
acctcggcaaagatgctgtcgatcgttcccctgatggcaggcggtggcatgtacgagact
ggggccggtgggtccgcacccaagcatgtccagcagttgatcgaagaaaaccacctccgc
tgggactcgctcggtgagttcctggcgctggccgtgtcgctggaagagacgggcatcaag
accgacaacgtcaaagccacactgctgggcagaacgctggatgctgcaaccggcaagctg
ctcgacaacaacaagtcgccctctcgtcgtaccggtgagctggacaaccgcggcagccac
ttctacctggcgctgtactgggcgcaggagctagcagcacaaaccgaagatactcaactg
caggcccgtttcgcgcccctggcgaagcagctacaagacaacgagcaagccattctcgct
gaactggccgaggttcagggcaagcccgtggagatcggcggctattaccgctccaatcct
gagctgaccagcaaagcgatgcgtcctagcgcaacgttcaacgccgcgctagccgccctg
gcttga
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