Pseudomonas sp. MT-1: MT1_2354
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Entry
MT1_2354 CDS
T10396
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psmt Pseudomonas sp. MT-1
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmt03400
]
MT1_2354
Enzymes [BR:
psmt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MT1_2354
DNA repair and recombination proteins [BR:
psmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MT1_2354
Prokaryotic type
MT1_2354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAP79532
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All DBs
Position
complement(2608454..2609881)
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AA seq
475 aa
AA seq
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MNQLLWLRTDLRVSDNTALAAAMSTGPTVALYLITPGQWLAHDDAPCKVDFWLRNLAELS
IRLSELNVPLLIRTVEDWQAVPAVIVDICRTHEISTLHVNDEYGVNEQRRDDAVAEALRK
TPTGMRRHLDQLLFAPGTITTLSGGYFKVFSQFRKVCYARLTQSLPACLPVPARQASLLI
VSDSVPQAVDGFAQPSDYLRSLWPAGEDFAQLRLAKFAEDELADYQQRRDFPAEPGTSQI
SAYLATGVISPRQCLHAALRANRGEHDSGNPGAVTWINELLWREFYKHVLVGYPHVSMGR
GFRRETDTLPWRHAPDELAAWQQGRTGFPIIDAAMRQLLATGWMHNRLRMIVAMFLSKNL
LIDWREGERWFMQHLIDGDLAANNGGWQWSASTGTDSVPYFRLFNPLSQSAKFDPDGRFL
RRWLPELAELDKRGIHNPAKLNGLFAGVEYPSPIIDLPMSRERALSAFRQLGEAL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcttctctggctacgcaccgatttacgcgtcagtgacaataccgccttggct
gccgcgatgagcaccggtccgaccgtggcgctctatctgattacacctgggcagtggctc
gcccatgacgacgcgccgtgcaaggtcgatttctggctacgcaatctggccgaactgtcg
atacgcctatcggaactgaacgtcccgctgctgatccgcaccgttgaagactggcaggca
gtgccggcggtgattgttgatatttgccgcacccatgagatcagtaccctgcacgtcaac
gacgagtacggtgtgaacgagcagcgccgtgacgacgcggtcgccgaagcgctgcgaaaa
acgcccaccggcatgcgtcgccaccttgatcagctgttgtttgcaccagggaccatcacg
acgctgtcgggtggttacttcaaggtcttcagccagttcagaaaggtgtgttatgcccgg
ctgacacagtcacttcccgcgtgtctccccgtcccggctcgccaggcatcgctgctgatt
gtcagcgactcggtgccgcaggcagtcgatggtttcgcccaacccagcgactatctgcgt
tcgctgtggccggctggcgaagactttgcgcaacttcgccttgcaaagttcgccgaagac
gagctggcggactatcaacaacgtcgcgacttccccgccgagccgggtaccagccagatt
tccgcctatttggcaacaggcgtcatttcccctcggcaatgtctgcatgccgctttaaga
gccaatcggggcgaacacgacagcggcaatcccggtgcggtcacctggatcaatgaactg
ctctggcgagagttctacaaacatgtactggtcggctatccacacgtctcgatgggccgg
gggttccggcgagaaaccgataccctgccctggcgtcacgcaccggatgagctggcggcc
tggcagcagggccgtaccggatttccgatcatcgatgccgccatgcgccaattgctggcc
acgggctggatgcacaatcgcctgcgcatgatcgtcgccatgtttctgagcaaaaacctg
ttgatcgactggcgcgaaggtgagcgttggttcatgcagcacctgatcgatggcgacctc
gccgccaataatggcggatggcagtggagcgcctcgacggggaccgattctgtgccctat
ttccgcctgttcaacccgctcagtcagtcggccaagttcgacccggacggccggttcctg
cggcgttggctgcccgagctggccgaattggacaaacgcggaattcacaacccagcgaag
ctgaacgggctgttcgcaggcgtcgagtacccgtctcctatcatcgatctgccgatgagc
cgtgagcgtgcgctttcagcatttaggcaattgggagaggcgctgtga
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