Pseudomonas sp. MT-1: MT1_2450
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Entry
MT1_2450 CDS
T10396
Name
(GenBank) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt03420
Nucleotide excision repair
Brite
Enzymes [BR:
psmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MT1_2450
Transcription machinery [BR:
psmt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MT1_2450
Chromosome and associated proteins [BR:
psmt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MT1_2450
DNA repair and recombination proteins [BR:
psmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MT1_2450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BAP79628
LinkDB
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Position
complement(2714843..2717101)
Genome browser
AA seq
752 aa
AA seq
DB search
MSYRVAVRALCEFTAKQGDLDLRFTPSPTALEGMAGHATVTSRRGDGYEREVTLEANYRN
LTVRGRADGYDPTKNRLEEIKTYRGDLARQPANHRYLHWAQAKVYGWLLCEARTLESLEI
ALVYFDVVSQKETLLVETCTAEHLRAFFETQCQYFIAWADQELAHRAERDQALRSLTFPY
GEFRSGQRQLAEAVYKAACTGTHLMAQAPTGIGKTLATLFPQLKAMPGQQLDKLYFLTAK
TSGRQLALNALDSLAGQQTPLRVLELIARDKACEHPDKACHGESCPLACGFYDRLPAARD
EAITRPFLDQATLREVALAHQVCPYYLSQEMARWADVVVGDYNYYFDLSALLYSLALLNQ
WRIGVLVDEAHNLLERGRSMYSAELNLLTFKGLRKTLPIVLKKPIERVLRCWGDVHRLQA
DAYQVLPGLPQVLINALQQAVSAITDYLGENPAGVDSALQSAYFDAMQFCKLAELFGDHS
LIDCTLLPAHGRSNAKASVLCLRNVIPAPFLASRIREARSCVLFSATLTPQRFYADTLGV
PANRVWVDVESPFRAEQLQIRLAQHISTRYQHRSASLQAVVDLLAQQYQKRPGNYLAFFS
SFDYLQQVTSLLRVQHPELPYWEQTRSMDEGARNAFLARFTDESCGIGFAVLGGAFSEGI
DLPGKRLIGAFVATLGLPQVNPVNEQMKARMDHLFGTGYDYTYLYPGLQKVVQAAGRVIR
TTEDVGVVHLIDDRFGRREIRRLLPAWWGSPS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
ttgagttatcgggtcgcagtccgtgcgttgtgcgagttcaccgcaaaacaaggcgatctg
gatcttcgtttcacaccctcacctaccgcgctagagggcatggccggacacgccacggtc
acgtcgcggcgcggcgatggatacgagcgagaagtcacgctcgaagccaactatcgcaac
cttaccgtccgcggccgtgcggacggctatgacccgacaaagaaccgactggaggagatc
aagacctaccgcggtgacctcgcccggcagccggccaaccaccgttacctacactgggcg
caagccaaggtctacggctggctgctctgcgaggcacgcacgttggaatcgctggagatc
gcgctggtgtatttcgatgtggtcagccagaaggaaaccctgctggtcgaaacctgtacc
gccgaacaccttcgggcttttttcgaaacccaatgtcaatacttcatcgcatgggccgat
caggaactggcccaccgagccgagcgtgaccaggcactgcgaagcctgacgttcccctac
ggtgaatttcgcagcggccagcggcaactggccgaagcggtatacaaggccgcttgcacc
ggtacccacctgatggctcaggcaccgacgggtattggcaagaccctggctaccctattt
ccgcaattgaaggccatgcccggccagcagctagacaagctgtatttcctcaccgctaaa
acctcggggcgacagctggcgttgaatgcactcgacagcctggcgggccagcaaacgcct
ctgcgagtgttggaactgatcgcgcgggataaagcgtgtgagcacccggacaaggcttgt
cacggtgaatcctgcccgctcgcttgcggcttctacgaccgcctcccggccgcacgcgac
gaggccattactcgcccgtttctcgatcaggcaacactgcgcgaggtggccttggcgcac
caagtgtgtccctactatctgagccaggaaatggctcgctgggccgatgtggtggtgggt
gactacaactactacttcgatctgagcgccctgctctacagcctggcgttgctcaaccag
tggcgcatcggggtgctggtggacgaggcgcacaatctgctcgaacgcggccgatcgatg
tacagcgccgagcttaatctgcttactttcaagggtttacgaaaaactcttccgatcgtg
ttgaagaagccgatcgaacgcgtgcttcgttgctggggtgatgtacaccgcctgcaggca
gacgcctatcaggttctgccagggctgccgcaggtgctcatcaacgcgcttcagcaagcc
gtaagcgcaatcaccgactacctcggcgagaacccagcgggggtagactcggcgttgcag
tcggcctatttcgacgctatgcagttctgcaaactggcagagctgttcggcgaccattca
ctgatcgactgcacgctgctgccagcgcacggccgcagcaatgccaaagcatctgtcctt
tgcttgcgcaacgtgattcccgcccccttcctcgcctcccgcatccgtgaggcccgctct
tgcgtactgttttccgcgaccctgacaccgcagcgcttttacgccgacaccctcggtgtg
ccggccaatcgggtatgggtcgacgtcgaatctccgtttcgcgcagagcagttgcagata
cgccttgcgcagcacatctccactcgctaccagcatcgcagcgcctcgcttcaagctgtc
gtcgacctgcttgcccagcagtatcagaagcgccctggcaactacctggcgttcttcagc
agctttgactacttgcagcaggtcactagcctcctccgtgttcaacaccctgagctgccc
tactgggagcagacgcgcagcatggatgaaggggcgcgcaacgcctttcttgcgcgtttc
acggatgagagctgcggtattggtttcgcggtcttgggcggtgctttttccgagggcatc
gacctgccgggtaagcggctgattggtgcttttgttgccacgctgggcctaccgcaggtc
aatcccgttaacgagcagatgaaggcgcggatggatcatttgttcggcacgggctatgac
tacacctacctctatcccgggctgcagaaggtggtgcaggccgcaggccgcgtcattcgt
acaaccgaagacgtcggcgtcgtacacctgatcgatgaccgcttcggcagacgagagatc
agacgactactgcctgcttggtggggatctccgagttag
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