Pseudomonas sp. MT-1: MT1_2527
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Entry
MT1_2527 CDS
T10396
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psmt Pseudomonas sp. MT-1
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psmt03000
]
MT1_2527
Transcription factors [BR:
psmt03000
]
Prokaryotic type
Helix-turn-helix
Other families
MT1_2527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
AAA_5
HTH_8
AAA_2
AAA
HTH_30
HTH_22
Mg_chelatase
AAA_3
AAA_7
HTH_23
HTH_17
HTH_20
nSTAND6
AAA_16
DUF2089
PAS_8
MCM
HTH_psq
HTH_7
DUF815
HTH_10
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAP79703
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Position
2821967..2823838
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AA seq
623 aa
AA seq
DB search
MANPAQPISHQALVEGSWSRCERYGLNPLSIPSFGDPAERDVNALLERQRNLVQTTQREV
LPYYENILSNSSCLILLADSGGQLLESWGDRRFVEPAQQRGFKPGASWMERDTGTNAIGT
ALASGQAVHIQRDEHFLQANRYLSGAASPIYDAQRQLIAVLDVSSDSYLPPSHTLGMVKM
MSQSVENRLILNLFRDDYFQLTFNTGQDNLDSQWAGLLVFDESGLIVSANRRADNLLGVA
LTRSRIDRLFDVPLRQLLSQPEDQPMLLRTAGNHRFHGLVRRPQKPRIQARDFRTPDSRP
EHTIDLASIDQGDPQVHKVIRQAQLMLEKDIPILVNGETGVGKEVLVKALHAASSRANAP
LIAVNCAAIPSELIESELFGYEKGAFTGAHQKGSLGLIRKADGGVLFLDEIGDMPLSLQA
RLLRVLQERSVQPLGGGEPYSVDFRLICATNRSLRQEVEKGRFRQDLFYRVSGLGVKLPP
LRARHDKHALFQRVWEQHREPHQWAGLSPDVLRLFDSHPWPGNIRQLSSVVQVALALAQD
QPIRVEHLPDDFLADADVRLTAQGRTGASASTSETVPFPMLANEPLRAQFEACRGNVSHL
ARHLGVSRNTLYKRLRAEGLYPT
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccagcccagcccatctcacaccaggctttggtagaaggctcgtggagccgt
tgcgaacgctacggactaaatccgctcagcatccccagcttcggcgaccccgcggagaga
gacgtcaatgccctgctggaacgtcagcgaaacctggtccagaccacgcagcgtgaagtg
ctgccttattacgagaacatcctttcgaattcgagctgcctgattctgcttgccgacagc
ggcggacagttgcttgagtcatggggtgacaggcgcttcgtcgagcccgcgcagcagcgc
ggattcaagccgggcgccagctggatggagcgagataccggaaccaatgcgatcggcacc
gcactggccagcgggcaagccgtgcatatccaacgtgacgagcacttcctccaggccaac
cgctatctgtccggcgcggcgtcgcccatttacgacgcgcaacgccagctgatcgcggtg
ctcgacgtgtccagcgacagctacctcccgccatcgcacacgcttggcatggtcaaaatg
atgagccagtcggttgagaacaggctgatcttgaatctgttccgcgatgactatttccag
ctgacgttcaacaccggccaggacaatcttgatagtcagtgggccggtctgttggtcttc
gacgagtcggggctgatcgtttcagccaatcgacgtgcagacaatttgctgggcgtggcg
cttacgcgtagccgcatcgacaggctgttcgacgtcccgctgcggcagctgctcagccag
cccgaggaccagccgatgctgctgcggacagcgggcaatcatcgctttcatggccttgtt
cgacgcccgcagaagccgcgtattcaggcccgtgattttcggacaccggatagccgaccg
gaacataccatcgacctggcaagcatcgatcagggagacccgcaggttcataaggtgatt
cgccaggctcagctcatgctcgaaaaagacattccgattctggtgaacggcgaaacgggt
gtcgggaaggaagtgctggtcaaagcattgcatgcggccagctcacgagcgaacgccccg
ctgatagccgtgaactgcgcagcgattcccagcgagctgatcgagtccgaactcttcggc
tacgaaaaaggtgcattcaccggcgctcaccagaaaggcagcctgggcctgatccgcaaa
gcagatggtggtgtgctattcctcgatgaaatcggtgatatgccgctgagtttgcaggcg
cgtctgttgcgtgtcctgcaggagcgcagcgtccagccgctgggcggcggtgagccctat
tcagtcgactttcgattgatctgtgcaactaaccgttcgctacgtcaggaagtggaaaag
ggtcgctttcgtcaggatttgttctaccgggtcagcggcctcggcgtcaaattgcccccg
ctccgcgcgcgtcatgacaagcacgcccttttccaacgggtatgggaacagcaccgcgaa
ccacatcagtgggccggtctcagtcccgacgtgctgcgcctgttcgacagccacccttgg
ccgggaaacatacgtcagctgagcagcgttgtgcaggtcgcgctagcgctggcccaggac
caaccgatccgagtggaacatttaccagatgatttccttgccgatgcggacgtaaggctg
acggctcaaggtagaaccggggcctccgcctcgacaagcgaaacagtaccgttcccaatg
cttgcgaatgagcctctgcgtgctcagttcgaagcctgtcgcggcaacgtttcgcacttg
gcccggcatctcggtgtgagccgcaacaccttgtacaagcgtttgcgcgccgaagggttg
tacccgacataa
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integrated database retrieval system
