Pseudomonas sp. MT-1: MT1_2948
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Entry
MT1_2948 CDS
T10396
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psmt Pseudomonas sp. MT-1
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmt03032
]
MT1_2948
03400 DNA repair and recombination proteins [BR:
psmt03400
]
MT1_2948
Enzymes [BR:
psmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MT1_2948
DNA replication proteins [BR:
psmt03032
]
Prokaryotic type
DNA Topoisomerases
MT1_2948
DNA repair and recombination proteins [BR:
psmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MT1_2948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAP80123
LinkDB
All DBs
Position
complement(3287624..3290236)
Genome browser
AA seq
870 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSANKEPVKRGKAAAAEAPA
LSPKEKAKRQLFTRMGIDPEHGWKAKYEILPGKEKVIDELRRLAKEADTIYLATDLDREG
EAIAWHLRESIGGDDSRYKRVVFNEITKKAIQEAFSKPGDLDINRVNAQQARRFLDRVVG
YMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFVPEEYWEVHADLATAEQAKIRF
EVARENGEAFKPLNEGHAMAALEQLKGASYSVAKREDKPTSSKPSAPFITSTLQQAASNR
LGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALSMVRGFIEDEFGDKYLPEKPNFYS
SKEGAQEAHEAIRPSDVNLRPAQLTGMERDAERLYDLIWRQFVACQMPPAQYLSTSVTVT
AGNYELRAKGRILRFDGYTKVMPQQSKSGEDDVLPDMNKGDGMKLIKLDPSQHFTKPPAR
FSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVSLHNRRFYSEKMGDIVTERLSESFNN
LMDYGFTAGMEENLDDVAQGEREWKHVLDEFYGDFKKKLEVAEASENGMRANQPTLTDIP
CKVCGRPMMIRTASTGVFLGCSGYSLPPKERCKSTVNLIPGDEIAADDEGESESRVLLGK
HRCPICSTAMDAYLLDETHKLHICGNNPDCTGYEIEEGQYRIKGYEGPSLECDKCGSEMQ
LKTGRFGKFFGCTNGECKNTRKLLRSGEAAPPKMDAVKMPELKCEKVDDTYVLRDGASGL
FLAASQFPKNRETRAPLVLELIPHKDEIDPKYHFLLSAPQKDPEGRPAVIRFSRKTKEQY
VQTEVNGKPTGWKAFFDGSKWKVEDKSTGK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggtcatcgtggaatcaccggccaaggccaagacaatcaacaagtat
ttgggcaaccaatacgtggtgaagtcgagtatcggccacatccgcgaccttcccaccagc
ggctctgccaacaaggagccggtcaagcgcggcaaggccgcagcggccgaagccccggcg
ctttcgccgaaggagaaagccaagcgtcagctcttcacccgcatgggcatcgatcccgag
cacggctggaaggcgaagtatgaaatcctgcccggcaaagaaaaggtcatcgacgagctt
cgtcgcctggccaaggaagccgacaccatctatctcgcgactgacttggatagagaaggg
gaggccatcgcttggcacctgcgcgaatccattggcggcgacgacagccgttacaagcgc
gtggtgttcaacgagatcaccaaaaaggcgatccaggaggccttctccaagccgggcgat
ctggacatcaacagggtcaatgcacaacaggcgcggcgctttctcgaccgggtggtgggc
tacatggtttccccgctgctctgggcaaagatcgctcgcggactctctgcaggacgcgtg
caatcggttgcggtgaagctggtagtcgagcgcgagcgcgagatccgtgcctttgttccg
gaagagtactgggaagtccatgctgacctggccactgccgagcaggcgaagatccgtttc
gaggtcgctcgcgaaaatggtgaggcgttcaagccgctgaacgaaggccatgcgatggcc
gcgctcgagcagctcaaaggtgcgagctacagtgtcgccaagcgcgaagacaagccgacc
agcagcaaaccctcggcgcctttcattacctccacactgcagcaggccgcgagcaaccgt
ctcggctttggtgtgaagaagaccatgatgatggcgcagcggctctacgaagccggctac
atcacttacatgcgtaccgactcgaccaacctgtcggctgatgccctgagcatggttcgt
ggctttattgaagacgaatttggcgacaagtatctccctgagaaaccgaacttctattcc
agcaaggaaggcgctcaggaagcgcacgaggcgattcgtccttcggacgtcaatttgcgc
ccggcacagctgaccggcatggagcgggacgccgagcgcctctatgacctgatctggcgc
cagtttgtcgcctgccaaatgccgccggctcagtatctttcaaccagcgtcacagtgacc
gccggaaattacgagttgcgcgcgaagggtcggatcctcaggttcgacggttacaccaag
gtcatgccgcagcagagcaagagcggtgaagacgacgtcctgccggacatgaataagggc
gacgggatgaagctgatcaagctcgacccgagccagcacttcaccaagccacctgcgcgc
ttctccgaagcgagcctggtcaaggagatggaaaagcgcggaattggtcggccgtcgacc
tatgcggcgatcatctcgacgatccaggatcgcggctatgtctctctgcataaccgccgt
ttctattccgagaagatgggcgacatcgttaccgagcgcctctcggaaagcttcaacaac
ctgatggactatggtttcactgccggcatggaggagaacctcgatgatgtcgcacagggt
gagcgcgagtggaaacatgtactcgacgagttctacggtgacttcaagaagaagctggag
gtggctgaggcaagcgagaacgggatgcgtgccaaccagcccacgctgaccgacattccg
tgcaaggtctgcggacgtccgatgatgattcgcacagcctccactggggtctttctcggt
tgctccggctacagcctgccgcctaaagagcgctgcaagtccaccgtcaacctcatccca
ggcgatgagattgccgctgatgatgaaggggagtccgaatctcgcgtactgttgggcaaa
catcgttgcccgatctgcagcacggcgatggatgcttacctgctcgacgaaacccataag
ctgcatatctgtggcaacaaccccgattgcacgggttacgagatcgaagagggccagtac
cgcatcaagggctacgaggggccgagtctggagtgcgacaagtgcggcagtgaaatgcag
ctcaagacgggccgcttcggcaagttcttcggttgcaccaacggcgaatgcaagaacacg
cgtaagttgctcagaagcggtgaggcggctccgccgaagatggatgcggtgaagatgcct
gagcttaaatgtgaaaaggtcgacgacacctatgtactgcgcgatggcgcttccggtttg
ttcctggccgccagccagtttccgaagaatcgcgagacccgggcaccgttagtactggag
ttgattcctcacaaggatgagatcgacccgaagtatcactttctgctgagtgcgcctcag
aaggatccggaaggccgcccggctgtgatccgcttcagccgcaagaccaaggagcagtac
gtgcaaaccgaggtcaacggcaagccgactggctggaaagccttcttcgatggcagcaag
tggaaagtagaggacaagagcaccggtaagtaa
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