Pseudomonas sp. MT-1: MT1_2989
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Entry
MT1_2989 CDS
T10396
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
psmt Pseudomonas sp. MT-1
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psmt03032
]
MT1_2989
03036 Chromosome and associated proteins [BR:
psmt03036
]
MT1_2989
03400 DNA repair and recombination proteins [BR:
psmt03400
]
MT1_2989
DNA replication proteins [BR:
psmt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MT1_2989
Chromosome and associated proteins [BR:
psmt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
MT1_2989
DNA repair and recombination proteins [BR:
psmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
MT1_2989
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
CATASP
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAP80164
LinkDB
All DBs
Position
complement(3335464..3335748)
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AA seq
94 aa
AA seq
DB search
MTKSELIERIVTQQGLLSSKDVELAIKTMLEQMAQALATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVPLDGKFVPHFKPGKELRDRVNEEE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggagttgatcgaacgcatcgtcacccaacaaggccttctttcgtccaag
gatgttgagctggccatcaagaccatgctcgaacagatggcccaggcactggccaccggc
gaccgcatcgaaatccgcggcttcggcagtttttccctccactatcgcgccccccgcgtc
ggccgaaatcccaaaaccggccaatccgtcccgcttgacggcaagttcgtcccgcatttc
aagccggggaaggagttgcgggatagggtcaatgaagaagaatag
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